Gene : Medtr5g036093 M. truncatula Mt4.0v1
Defline:  (1 of 6) 3.4.24.65 - Macrophage elastase / Metalloelastase Description:  matrix metalloproteinase
Genomic Order:  2182 Name:  ? Medtr5g036093
Secondary Identifier:  ? PAC:31090244
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g036093 0.5kb upstream 0.5kb upstream 1614 true chr5: 15722805-15724418 Medicago truncatula
Medtr5g036093 0.5kb upstream 0.5kb upstream 500 false chr5: 15722805-15723304 Medicago truncatula
Medtr5g036093 0.5kb downstream 0.5kb downstream 1614 true chr5: 15723305-15724918 Medicago truncatula
Medtr5g036093 0.5kb downstream 0.5kb downstream 500 false chr5: 15724419-15724918 Medicago truncatula
Medtr5g036093 1.0kb upstream 1.0kb upstream 2114 true chr5: 15722305-15724418 Medicago truncatula
Medtr5g036093 1.0kb upstream 1.0kb upstream 1000 false chr5: 15722305-15723304 Medicago truncatula
Medtr5g036093 1.0kb downstream 1.0kb downstream 2114 true chr5: 15723305-15725418 Medicago truncatula
Medtr5g036093 1.0kb downstream 1.0kb downstream 1000 false chr5: 15724419-15725418 Medicago truncatula
Medtr5g036093 2.0kb upstream 2.0kb upstream 3114 true chr5: 15721305-15724418 Medicago truncatula
Medtr5g036093 2.0kb upstream 2.0kb upstream 2000 false chr5: 15721305-15723304 Medicago truncatula
Medtr5g036093 2.0kb downstream 2.0kb downstream 3114 true chr5: 15723305-15726418 Medicago truncatula
Medtr5g036093 2.0kb downstream 2.0kb downstream 2000 false chr5: 15724419-15726418 Medicago truncatula
Medtr5g036093 5.0kb upstream 5.0kb upstream 6114 true chr5: 15718305-15724418 Medicago truncatula
Medtr5g036093 5.0kb upstream 5.0kb upstream 5000 false chr5: 15718305-15723304 Medicago truncatula
Medtr5g036093 5.0kb downstream 5.0kb downstream 6114 true chr5: 15723305-15729418 Medicago truncatula
Medtr5g036093 5.0kb downstream 5.0kb downstream 5000 false chr5: 15724419-15729418 Medicago truncatula
Medtr5g036093 10.0kb upstream 10.0kb upstream 11114 true chr5: 15713305-15724418 Medicago truncatula
Medtr5g036093 10.0kb upstream 10.0kb upstream 10000 false chr5: 15713305-15723304 Medicago truncatula
Medtr5g036093 10.0kb downstream 10.0kb downstream 11114 true chr5: 15723305-15734418 Medicago truncatula
Medtr5g036093 10.0kb downstream 10.0kb downstream 10000 false chr5: 15724419-15734418 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656193 5273 Angiosperm View MSA
122297787 5265 Fabidae View MSA
124036152 5270 Rosid View MSA
123609540 5271 Pentapetalae View MSA
122644188 5272 Eudicot View MSA
120928278 5274 Embryophyte View MSA
122968891 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.403        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain