Gene : Medtr5g038460 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF07063 - Domain of unknown function (DUF1338) (DUF1338) Description:  plant/T7N9-9 protein
Genomic Order:  2336 Name:  ? Medtr5g038460
Secondary Identifier:  ? PAC:31089210
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g038460 0.5kb upstream 0.5kb upstream 9907 true chr5: 16892587-16902493 Medicago truncatula
Medtr5g038460 0.5kb upstream 0.5kb upstream 500 false chr5: 16901994-16902493 Medicago truncatula
Medtr5g038460 0.5kb downstream 0.5kb downstream 9907 true chr5: 16892087-16901993 Medicago truncatula
Medtr5g038460 0.5kb downstream 0.5kb downstream 500 false chr5: 16892087-16892586 Medicago truncatula
Medtr5g038460 1.0kb upstream 1.0kb upstream 10407 true chr5: 16892587-16902993 Medicago truncatula
Medtr5g038460 1.0kb upstream 1.0kb upstream 1000 false chr5: 16901994-16902993 Medicago truncatula
Medtr5g038460 1.0kb downstream 1.0kb downstream 10407 true chr5: 16891587-16901993 Medicago truncatula
Medtr5g038460 1.0kb downstream 1.0kb downstream 1000 false chr5: 16891587-16892586 Medicago truncatula
Medtr5g038460 2.0kb upstream 2.0kb upstream 11407 true chr5: 16892587-16903993 Medicago truncatula
Medtr5g038460 2.0kb upstream 2.0kb upstream 2000 false chr5: 16901994-16903993 Medicago truncatula
Medtr5g038460 2.0kb downstream 2.0kb downstream 11407 true chr5: 16890587-16901993 Medicago truncatula
Medtr5g038460 2.0kb downstream 2.0kb downstream 2000 false chr5: 16890587-16892586 Medicago truncatula
Medtr5g038460 5.0kb upstream 5.0kb upstream 14407 true chr5: 16892587-16906993 Medicago truncatula
Medtr5g038460 5.0kb upstream 5.0kb upstream 5000 false chr5: 16901994-16906993 Medicago truncatula
Medtr5g038460 5.0kb downstream 5.0kb downstream 14407 true chr5: 16887587-16901993 Medicago truncatula
Medtr5g038460 5.0kb downstream 5.0kb downstream 5000 false chr5: 16887587-16892586 Medicago truncatula
Medtr5g038460 10.0kb upstream 10.0kb upstream 19407 true chr5: 16892587-16911993 Medicago truncatula
Medtr5g038460 10.0kb upstream 10.0kb upstream 10000 false chr5: 16901994-16911993 Medicago truncatula
Medtr5g038460 10.0kb downstream 10.0kb downstream 19407 true chr5: 16882587-16901993 Medicago truncatula
Medtr5g038460 10.0kb downstream 10.0kb downstream 10000 false chr5: 16882587-16892586 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308889 5265 Fabidae View MSA
124061001 5270 Rosid View MSA
123746435 5271 Pentapetalae View MSA
122792736 5272 Eudicot View MSA
122043338 5273 Angiosperm View MSA
121346049 5274 Embryophyte View MSA
123425162 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.732     High High
cufflinks 18.8     High  
cufflinks 34.731     High  
cufflinks 8.091       Low
cufflinks 7.56       Low
cufflinks 15.104     High  
cufflinks 23.168     High  
cufflinks 33.153     High  
cufflinks 7.91       Low

0 Strain