Gene : Medtr5g038850 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  2360
Name:  ? Medtr5g038850 Secondary Identifier:  ? PAC:31089691
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g038850 0.5kb upstream 0.5kb upstream 4894 true chr5: 17085037-17089930 Medicago truncatula
Medtr5g038850 0.5kb upstream 0.5kb upstream 500 false chr5: 17085037-17085536 Medicago truncatula
Medtr5g038850 0.5kb downstream 0.5kb downstream 4894 true chr5: 17085537-17090430 Medicago truncatula
Medtr5g038850 0.5kb downstream 0.5kb downstream 500 false chr5: 17089931-17090430 Medicago truncatula
Medtr5g038850 1.0kb upstream 1.0kb upstream 5394 true chr5: 17084537-17089930 Medicago truncatula
Medtr5g038850 1.0kb upstream 1.0kb upstream 1000 false chr5: 17084537-17085536 Medicago truncatula
Medtr5g038850 1.0kb downstream 1.0kb downstream 5394 true chr5: 17085537-17090930 Medicago truncatula
Medtr5g038850 1.0kb downstream 1.0kb downstream 1000 false chr5: 17089931-17090930 Medicago truncatula
Medtr5g038850 2.0kb upstream 2.0kb upstream 6394 true chr5: 17083537-17089930 Medicago truncatula
Medtr5g038850 2.0kb upstream 2.0kb upstream 2000 false chr5: 17083537-17085536 Medicago truncatula
Medtr5g038850 2.0kb downstream 2.0kb downstream 6394 true chr5: 17085537-17091930 Medicago truncatula
Medtr5g038850 2.0kb downstream 2.0kb downstream 2000 false chr5: 17089931-17091930 Medicago truncatula
Medtr5g038850 5.0kb upstream 5.0kb upstream 9394 true chr5: 17080537-17089930 Medicago truncatula
Medtr5g038850 5.0kb upstream 5.0kb upstream 5000 false chr5: 17080537-17085536 Medicago truncatula
Medtr5g038850 5.0kb downstream 5.0kb downstream 9394 true chr5: 17085537-17094930 Medicago truncatula
Medtr5g038850 5.0kb downstream 5.0kb downstream 5000 false chr5: 17089931-17094930 Medicago truncatula
Medtr5g038850 10.0kb upstream 10.0kb upstream 14394 true chr5: 17075537-17089930 Medicago truncatula
Medtr5g038850 10.0kb upstream 10.0kb upstream 10000 false chr5: 17075537-17085536 Medicago truncatula
Medtr5g038850 10.0kb downstream 10.0kb downstream 14394 true chr5: 17085537-17099930 Medicago truncatula
Medtr5g038850 10.0kb downstream 10.0kb downstream 10000 false chr5: 17089931-17099930 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312334 5265 Fabidae View MSA
124067279 5270 Rosid View MSA
123746369 5271 Pentapetalae View MSA
122785614 5272 Eudicot View MSA
122048036 5273 Angiosperm View MSA
121349861 5274 Embryophyte View MSA
123381473 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.055       High
cufflinks 0.329        
cufflinks 0.524        
cufflinks 0.497        
cufflinks 0.398        
cufflinks 0.274       Low
cufflinks 0.685        
cufflinks 0.382        
cufflinks 0.494        

0 Strain