Gene : Medtr5g040740 M. truncatula Mt4.0v1
Defline:  (1 of 19) PTHR31384:SF19 - AUXIN RESPONSE FACTOR 17 Description:  auxin response factor 1
Genomic Order:  2460 Name:  ? Medtr5g040740
Secondary Identifier:  ? PAC:31089922
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g040740 0.5kb upstream 0.5kb upstream 1881 true chr5: 17913541-17915421 Medicago truncatula
Medtr5g040740 0.5kb upstream 0.5kb upstream 500 false chr5: 17913541-17914040 Medicago truncatula
Medtr5g040740 0.5kb downstream 0.5kb downstream 1881 true chr5: 17914041-17915921 Medicago truncatula
Medtr5g040740 0.5kb downstream 0.5kb downstream 500 false chr5: 17915422-17915921 Medicago truncatula
Medtr5g040740 1.0kb upstream 1.0kb upstream 2381 true chr5: 17913041-17915421 Medicago truncatula
Medtr5g040740 1.0kb upstream 1.0kb upstream 1000 false chr5: 17913041-17914040 Medicago truncatula
Medtr5g040740 1.0kb downstream 1.0kb downstream 2381 true chr5: 17914041-17916421 Medicago truncatula
Medtr5g040740 1.0kb downstream 1.0kb downstream 1000 false chr5: 17915422-17916421 Medicago truncatula
Medtr5g040740 2.0kb upstream 2.0kb upstream 3381 true chr5: 17912041-17915421 Medicago truncatula
Medtr5g040740 2.0kb upstream 2.0kb upstream 2000 false chr5: 17912041-17914040 Medicago truncatula
Medtr5g040740 2.0kb downstream 2.0kb downstream 3381 true chr5: 17914041-17917421 Medicago truncatula
Medtr5g040740 2.0kb downstream 2.0kb downstream 2000 false chr5: 17915422-17917421 Medicago truncatula
Medtr5g040740 5.0kb upstream 5.0kb upstream 6381 true chr5: 17909041-17915421 Medicago truncatula
Medtr5g040740 5.0kb upstream 5.0kb upstream 5000 false chr5: 17909041-17914040 Medicago truncatula
Medtr5g040740 5.0kb downstream 5.0kb downstream 6381 true chr5: 17914041-17920421 Medicago truncatula
Medtr5g040740 5.0kb downstream 5.0kb downstream 5000 false chr5: 17915422-17920421 Medicago truncatula
Medtr5g040740 10.0kb upstream 10.0kb upstream 11381 true chr5: 17904041-17915421 Medicago truncatula
Medtr5g040740 10.0kb upstream 10.0kb upstream 10000 false chr5: 17904041-17914040 Medicago truncatula
Medtr5g040740 10.0kb downstream 10.0kb downstream 11381 true chr5: 17914041-17925421 Medicago truncatula
Medtr5g040740 10.0kb downstream 10.0kb downstream 10000 false chr5: 17915422-17925421 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122287870 5265 Fabidae View MSA
124028292 5270 Rosid View MSA
123744136 5271 Pentapetalae View MSA
122770913 5272 Eudicot View MSA
122051947 5273 Angiosperm View MSA
121312823 5274 Embryophyte View MSA
123349961 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain