Gene : Medtr5g041700 M. truncatula Mt4.0v1
Defline:  (1 of 40) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Description:  expansin A10
Genomic Order:  2513 Name:  ? Medtr5g041700
Secondary Identifier:  ? PAC:31091073
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g041700 0.5kb upstream 0.5kb upstream 2745 true chr5: 18299811-18302555 Medicago truncatula
Medtr5g041700 0.5kb upstream 0.5kb upstream 500 false chr5: 18302056-18302555 Medicago truncatula
Medtr5g041700 0.5kb downstream 0.5kb downstream 2745 true chr5: 18299311-18302055 Medicago truncatula
Medtr5g041700 0.5kb downstream 0.5kb downstream 500 false chr5: 18299311-18299810 Medicago truncatula
Medtr5g041700 1.0kb upstream 1.0kb upstream 3245 true chr5: 18299811-18303055 Medicago truncatula
Medtr5g041700 1.0kb upstream 1.0kb upstream 1000 false chr5: 18302056-18303055 Medicago truncatula
Medtr5g041700 1.0kb downstream 1.0kb downstream 3245 true chr5: 18298811-18302055 Medicago truncatula
Medtr5g041700 1.0kb downstream 1.0kb downstream 1000 false chr5: 18298811-18299810 Medicago truncatula
Medtr5g041700 2.0kb upstream 2.0kb upstream 4245 true chr5: 18299811-18304055 Medicago truncatula
Medtr5g041700 2.0kb upstream 2.0kb upstream 2000 false chr5: 18302056-18304055 Medicago truncatula
Medtr5g041700 2.0kb downstream 2.0kb downstream 4245 true chr5: 18297811-18302055 Medicago truncatula
Medtr5g041700 2.0kb downstream 2.0kb downstream 2000 false chr5: 18297811-18299810 Medicago truncatula
Medtr5g041700 5.0kb upstream 5.0kb upstream 7245 true chr5: 18299811-18307055 Medicago truncatula
Medtr5g041700 5.0kb upstream 5.0kb upstream 5000 false chr5: 18302056-18307055 Medicago truncatula
Medtr5g041700 5.0kb downstream 5.0kb downstream 7245 true chr5: 18294811-18302055 Medicago truncatula
Medtr5g041700 5.0kb downstream 5.0kb downstream 5000 false chr5: 18294811-18299810 Medicago truncatula
Medtr5g041700 10.0kb upstream 10.0kb upstream 12245 true chr5: 18299811-18312055 Medicago truncatula
Medtr5g041700 10.0kb upstream 10.0kb upstream 10000 false chr5: 18302056-18312055 Medicago truncatula
Medtr5g041700 10.0kb downstream 10.0kb downstream 12245 true chr5: 18289811-18302055 Medicago truncatula
Medtr5g041700 10.0kb downstream 10.0kb downstream 10000 false chr5: 18289811-18299810 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313944 5265 Fabidae View MSA
124072137 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.592        
cufflinks 124.362     High High
cufflinks 87.081     High  
cufflinks 0.704       Low
cufflinks 135.785     High High
cufflinks 0.878       Low
cufflinks 6.483        
cufflinks 92.635     High  
cufflinks 5.446        

0 Strain