Gene : Medtr5g027970 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10218:SF192 - EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 3 Description:  extra-large GTP-binding protein
Genomic Order:  1677 Name:  ? Medtr5g027970
Secondary Identifier:  ? PAC:31086329
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g027970 0.5kb upstream 0.5kb upstream 6436 true chr5: 11683023-11689458 Medicago truncatula
Medtr5g027970 0.5kb upstream 0.5kb upstream 500 false chr5: 11688959-11689458 Medicago truncatula
Medtr5g027970 0.5kb downstream 0.5kb downstream 6436 true chr5: 11682523-11688958 Medicago truncatula
Medtr5g027970 0.5kb downstream 0.5kb downstream 500 false chr5: 11682523-11683022 Medicago truncatula
Medtr5g027970 1.0kb upstream 1.0kb upstream 6936 true chr5: 11683023-11689958 Medicago truncatula
Medtr5g027970 1.0kb upstream 1.0kb upstream 1000 false chr5: 11688959-11689958 Medicago truncatula
Medtr5g027970 1.0kb downstream 1.0kb downstream 6936 true chr5: 11682023-11688958 Medicago truncatula
Medtr5g027970 1.0kb downstream 1.0kb downstream 1000 false chr5: 11682023-11683022 Medicago truncatula
Medtr5g027970 2.0kb upstream 2.0kb upstream 7936 true chr5: 11683023-11690958 Medicago truncatula
Medtr5g027970 2.0kb upstream 2.0kb upstream 2000 false chr5: 11688959-11690958 Medicago truncatula
Medtr5g027970 2.0kb downstream 2.0kb downstream 7936 true chr5: 11681023-11688958 Medicago truncatula
Medtr5g027970 2.0kb downstream 2.0kb downstream 2000 false chr5: 11681023-11683022 Medicago truncatula
Medtr5g027970 5.0kb upstream 5.0kb upstream 10936 true chr5: 11683023-11693958 Medicago truncatula
Medtr5g027970 5.0kb upstream 5.0kb upstream 5000 false chr5: 11688959-11693958 Medicago truncatula
Medtr5g027970 5.0kb downstream 5.0kb downstream 10936 true chr5: 11678023-11688958 Medicago truncatula
Medtr5g027970 5.0kb downstream 5.0kb downstream 5000 false chr5: 11678023-11683022 Medicago truncatula
Medtr5g027970 10.0kb upstream 10.0kb upstream 15936 true chr5: 11683023-11698958 Medicago truncatula
Medtr5g027970 10.0kb upstream 10.0kb upstream 10000 false chr5: 11688959-11698958 Medicago truncatula
Medtr5g027970 10.0kb downstream 10.0kb downstream 15936 true chr5: 11673023-11688958 Medicago truncatula
Medtr5g027970 10.0kb downstream 10.0kb downstream 10000 false chr5: 11673023-11683022 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299612 5265 Fabidae View MSA
124067368 5270 Rosid View MSA
123753247 5271 Pentapetalae View MSA
122788427 5272 Eudicot View MSA
122051090 5273 Angiosperm View MSA
121350820 5274 Embryophyte View MSA
123381896 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.56        
cufflinks 0.283       Low
cufflinks 0.353        
cufflinks 0.612        
cufflinks 0.641        
cufflinks 0.814        
cufflinks 3.555       High
cufflinks 0.296        
cufflinks 0.837        

0 Strain