Gene : Medtr5g029230 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR35695:SF1 - GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC Description:  phospholipid/glycerol acyltransferase family protein
Genomic Order:  1725 Name:  ? Medtr5g029230
Secondary Identifier:  ? PAC:31088760
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-1319 Medicago truncatula pathologic  
Mtruncatula PWY4FS-7 Medicago truncatula pathologic  
Mtruncatula PWY-7411 Medicago truncatula pathologic  
Mtruncatula TRIGLSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g029230 0.5kb upstream 0.5kb upstream 8577 true chr5: 12224285-12232861 Medicago truncatula
Medtr5g029230 0.5kb upstream 0.5kb upstream 500 false chr5: 12232362-12232861 Medicago truncatula
Medtr5g029230 0.5kb downstream 0.5kb downstream 8577 true chr5: 12223785-12232361 Medicago truncatula
Medtr5g029230 0.5kb downstream 0.5kb downstream 500 false chr5: 12223785-12224284 Medicago truncatula
Medtr5g029230 1.0kb upstream 1.0kb upstream 9077 true chr5: 12224285-12233361 Medicago truncatula
Medtr5g029230 1.0kb upstream 1.0kb upstream 1000 false chr5: 12232362-12233361 Medicago truncatula
Medtr5g029230 1.0kb downstream 1.0kb downstream 9077 true chr5: 12223285-12232361 Medicago truncatula
Medtr5g029230 1.0kb downstream 1.0kb downstream 1000 false chr5: 12223285-12224284 Medicago truncatula
Medtr5g029230 2.0kb upstream 2.0kb upstream 10077 true chr5: 12224285-12234361 Medicago truncatula
Medtr5g029230 2.0kb upstream 2.0kb upstream 2000 false chr5: 12232362-12234361 Medicago truncatula
Medtr5g029230 2.0kb downstream 2.0kb downstream 10077 true chr5: 12222285-12232361 Medicago truncatula
Medtr5g029230 2.0kb downstream 2.0kb downstream 2000 false chr5: 12222285-12224284 Medicago truncatula
Medtr5g029230 5.0kb upstream 5.0kb upstream 13077 true chr5: 12224285-12237361 Medicago truncatula
Medtr5g029230 5.0kb upstream 5.0kb upstream 5000 false chr5: 12232362-12237361 Medicago truncatula
Medtr5g029230 5.0kb downstream 5.0kb downstream 13077 true chr5: 12219285-12232361 Medicago truncatula
Medtr5g029230 5.0kb downstream 5.0kb downstream 5000 false chr5: 12219285-12224284 Medicago truncatula
Medtr5g029230 10.0kb upstream 10.0kb upstream 18077 true chr5: 12224285-12242361 Medicago truncatula
Medtr5g029230 10.0kb upstream 10.0kb upstream 10000 false chr5: 12232362-12242361 Medicago truncatula
Medtr5g029230 10.0kb downstream 10.0kb downstream 18077 true chr5: 12214285-12232361 Medicago truncatula
Medtr5g029230 10.0kb downstream 10.0kb downstream 10000 false chr5: 12214285-12224284 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306286 5265 Fabidae View MSA
124061873 5270 Rosid View MSA
123741043 5271 Pentapetalae View MSA
122789862 5272 Eudicot View MSA
122046647 5273 Angiosperm View MSA
121346869 5274 Embryophyte View MSA
123424445 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.131        
cufflinks 8.649        
cufflinks 12.11     High High
cufflinks 2.731       Low
cufflinks 7.973        
cufflinks 3.949        
cufflinks 8.07        
cufflinks 11.345     High High
cufflinks 5.282        

0 Strain