Gene : Medtr5g029100 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31062:SF16 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 29-RELATED Description:  xyloglucan endotransglucosylase/hydrolase family protein
Genomic Order:  1719 Name:  ? Medtr5g029100
Secondary Identifier:  ? PAC:31087046
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g029100 0.5kb upstream 0.5kb upstream 4631 true chr5: 12157062-12161692 Medicago truncatula
Medtr5g029100 0.5kb upstream 0.5kb upstream 500 false chr5: 12157062-12157561 Medicago truncatula
Medtr5g029100 0.5kb downstream 0.5kb downstream 4631 true chr5: 12157562-12162192 Medicago truncatula
Medtr5g029100 0.5kb downstream 0.5kb downstream 500 false chr5: 12161693-12162192 Medicago truncatula
Medtr5g029100 1.0kb upstream 1.0kb upstream 5131 true chr5: 12156562-12161692 Medicago truncatula
Medtr5g029100 1.0kb upstream 1.0kb upstream 1000 false chr5: 12156562-12157561 Medicago truncatula
Medtr5g029100 1.0kb downstream 1.0kb downstream 5131 true chr5: 12157562-12162692 Medicago truncatula
Medtr5g029100 1.0kb downstream 1.0kb downstream 1000 false chr5: 12161693-12162692 Medicago truncatula
Medtr5g029100 2.0kb upstream 2.0kb upstream 6131 true chr5: 12155562-12161692 Medicago truncatula
Medtr5g029100 2.0kb upstream 2.0kb upstream 2000 false chr5: 12155562-12157561 Medicago truncatula
Medtr5g029100 2.0kb downstream 2.0kb downstream 6131 true chr5: 12157562-12163692 Medicago truncatula
Medtr5g029100 2.0kb downstream 2.0kb downstream 2000 false chr5: 12161693-12163692 Medicago truncatula
Medtr5g029100 5.0kb upstream 5.0kb upstream 9131 true chr5: 12152562-12161692 Medicago truncatula
Medtr5g029100 5.0kb upstream 5.0kb upstream 5000 false chr5: 12152562-12157561 Medicago truncatula
Medtr5g029100 5.0kb downstream 5.0kb downstream 9131 true chr5: 12157562-12166692 Medicago truncatula
Medtr5g029100 5.0kb downstream 5.0kb downstream 5000 false chr5: 12161693-12166692 Medicago truncatula
Medtr5g029100 10.0kb upstream 10.0kb upstream 14131 true chr5: 12147562-12161692 Medicago truncatula
Medtr5g029100 10.0kb upstream 10.0kb upstream 10000 false chr5: 12147562-12157561 Medicago truncatula
Medtr5g029100 10.0kb downstream 10.0kb downstream 14131 true chr5: 12157562-12171692 Medicago truncatula
Medtr5g029100 10.0kb downstream 10.0kb downstream 10000 false chr5: 12161693-12171692 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299261 5265 Fabidae View MSA
124067277 5270 Rosid View MSA
123745319 5271 Pentapetalae View MSA
122794660 5272 Eudicot View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.814     High  
cufflinks 9.103       Low
cufflinks 15.554     High  
cufflinks 58.45     High  
cufflinks 9.368       Low
cufflinks 41.891     High  
cufflinks 61.92     High High
cufflinks 10.393     High Low
cufflinks 78.404     High High

0 Strain