Gene : Medtr5g031460 M. truncatula Mt4.0v1
Defline:  (1 of 51) PF07883 - Cupin domain (Cupin_2) Description:  auxin-binding protein ABP19a
Genomic Order:  1879 Name:  ? Medtr5g031460
Secondary Identifier:  ? PAC:31090526
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g031460 0.5kb upstream 0.5kb upstream 1130 true chr5: 13490999-13492128 Medicago truncatula
Medtr5g031460 0.5kb upstream 0.5kb upstream 500 false chr5: 13490999-13491498 Medicago truncatula
Medtr5g031460 0.5kb downstream 0.5kb downstream 1130 true chr5: 13491499-13492628 Medicago truncatula
Medtr5g031460 0.5kb downstream 0.5kb downstream 500 false chr5: 13492129-13492628 Medicago truncatula
Medtr5g031460 1.0kb upstream 1.0kb upstream 1630 true chr5: 13490499-13492128 Medicago truncatula
Medtr5g031460 1.0kb upstream 1.0kb upstream 1000 false chr5: 13490499-13491498 Medicago truncatula
Medtr5g031460 1.0kb downstream 1.0kb downstream 1630 true chr5: 13491499-13493128 Medicago truncatula
Medtr5g031460 1.0kb downstream 1.0kb downstream 1000 false chr5: 13492129-13493128 Medicago truncatula
Medtr5g031460 2.0kb upstream 2.0kb upstream 2630 true chr5: 13489499-13492128 Medicago truncatula
Medtr5g031460 2.0kb upstream 2.0kb upstream 2000 false chr5: 13489499-13491498 Medicago truncatula
Medtr5g031460 2.0kb downstream 2.0kb downstream 2630 true chr5: 13491499-13494128 Medicago truncatula
Medtr5g031460 2.0kb downstream 2.0kb downstream 2000 false chr5: 13492129-13494128 Medicago truncatula
Medtr5g031460 5.0kb upstream 5.0kb upstream 5630 true chr5: 13486499-13492128 Medicago truncatula
Medtr5g031460 5.0kb upstream 5.0kb upstream 5000 false chr5: 13486499-13491498 Medicago truncatula
Medtr5g031460 5.0kb downstream 5.0kb downstream 5630 true chr5: 13491499-13497128 Medicago truncatula
Medtr5g031460 5.0kb downstream 5.0kb downstream 5000 false chr5: 13492129-13497128 Medicago truncatula
Medtr5g031460 10.0kb upstream 10.0kb upstream 10630 true chr5: 13481499-13492128 Medicago truncatula
Medtr5g031460 10.0kb upstream 10.0kb upstream 10000 false chr5: 13481499-13491498 Medicago truncatula
Medtr5g031460 10.0kb downstream 10.0kb downstream 10630 true chr5: 13491499-13502128 Medicago truncatula
Medtr5g031460 10.0kb downstream 10.0kb downstream 10000 false chr5: 13492129-13502128 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122264642 5265 Fabidae Singleton cluster - no MSA
124042679 5270 Rosid View MSA
123751196 5271 Pentapetalae View MSA
122788614 5272 Eudicot View MSA
122044188 5273 Angiosperm View MSA
121352324 5274 Embryophyte View MSA
123427618 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.148        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain