Gene : Medtr5g033220 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  1993
Name:  ? Medtr5g033220 Secondary Identifier:  ? PAC:31085305
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g033220 0.5kb upstream 0.5kb upstream 1720 true chr5: 14326721-14328440 Medicago truncatula
Medtr5g033220 0.5kb upstream 0.5kb upstream 500 false chr5: 14327941-14328440 Medicago truncatula
Medtr5g033220 0.5kb downstream 0.5kb downstream 1720 true chr5: 14326221-14327940 Medicago truncatula
Medtr5g033220 0.5kb downstream 0.5kb downstream 500 false chr5: 14326221-14326720 Medicago truncatula
Medtr5g033220 1.0kb upstream 1.0kb upstream 2220 true chr5: 14326721-14328940 Medicago truncatula
Medtr5g033220 1.0kb upstream 1.0kb upstream 1000 false chr5: 14327941-14328940 Medicago truncatula
Medtr5g033220 1.0kb downstream 1.0kb downstream 2220 true chr5: 14325721-14327940 Medicago truncatula
Medtr5g033220 1.0kb downstream 1.0kb downstream 1000 false chr5: 14325721-14326720 Medicago truncatula
Medtr5g033220 2.0kb upstream 2.0kb upstream 3220 true chr5: 14326721-14329940 Medicago truncatula
Medtr5g033220 2.0kb upstream 2.0kb upstream 2000 false chr5: 14327941-14329940 Medicago truncatula
Medtr5g033220 2.0kb downstream 2.0kb downstream 3220 true chr5: 14324721-14327940 Medicago truncatula
Medtr5g033220 2.0kb downstream 2.0kb downstream 2000 false chr5: 14324721-14326720 Medicago truncatula
Medtr5g033220 5.0kb upstream 5.0kb upstream 6220 true chr5: 14326721-14332940 Medicago truncatula
Medtr5g033220 5.0kb upstream 5.0kb upstream 5000 false chr5: 14327941-14332940 Medicago truncatula
Medtr5g033220 5.0kb downstream 5.0kb downstream 6220 true chr5: 14321721-14327940 Medicago truncatula
Medtr5g033220 5.0kb downstream 5.0kb downstream 5000 false chr5: 14321721-14326720 Medicago truncatula
Medtr5g033220 10.0kb upstream 10.0kb upstream 11220 true chr5: 14326721-14337940 Medicago truncatula
Medtr5g033220 10.0kb upstream 10.0kb upstream 10000 false chr5: 14327941-14337940 Medicago truncatula
Medtr5g033220 10.0kb downstream 10.0kb downstream 11220 true chr5: 14316721-14327940 Medicago truncatula
Medtr5g033220 10.0kb downstream 10.0kb downstream 10000 false chr5: 14316721-14326720 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314299 5265 Fabidae View MSA
124069674 5270 Rosid View MSA
123743249 5271 Pentapetalae View MSA
122791350 5272 Eudicot View MSA
122045203 5273 Angiosperm View MSA
121310415 5274 Embryophyte View MSA
123347905 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.607       Low
cufflinks 20.201     High  
cufflinks 21.609     High  
cufflinks 10.856     High  
cufflinks 26.281     High High
cufflinks 4.431       Low
cufflinks 12.437     High  
cufflinks 24.02     High  
cufflinks 9.183        

0 Strain