Gene : Medtr5g033510 M. truncatula Mt4.0v1
Defline:  (1 of 4) 2.6.1.27 - Tryptophan transaminase / Tryptophan aminotransferase Description:  tryptophan aminotransferase-like protein
Genomic Order:  2017 Name:  ? Medtr5g033510
Secondary Identifier:  ? PAC:31091013
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWYDQC-4 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g033510 0.5kb upstream 0.5kb upstream 2227 true chr5: 14432472-14434698 Medicago truncatula
Medtr5g033510 0.5kb upstream 0.5kb upstream 500 false chr5: 14434199-14434698 Medicago truncatula
Medtr5g033510 0.5kb downstream 0.5kb downstream 2227 true chr5: 14431972-14434198 Medicago truncatula
Medtr5g033510 0.5kb downstream 0.5kb downstream 500 false chr5: 14431972-14432471 Medicago truncatula
Medtr5g033510 1.0kb upstream 1.0kb upstream 2727 true chr5: 14432472-14435198 Medicago truncatula
Medtr5g033510 1.0kb upstream 1.0kb upstream 1000 false chr5: 14434199-14435198 Medicago truncatula
Medtr5g033510 1.0kb downstream 1.0kb downstream 2727 true chr5: 14431472-14434198 Medicago truncatula
Medtr5g033510 1.0kb downstream 1.0kb downstream 1000 false chr5: 14431472-14432471 Medicago truncatula
Medtr5g033510 2.0kb upstream 2.0kb upstream 3727 true chr5: 14432472-14436198 Medicago truncatula
Medtr5g033510 2.0kb upstream 2.0kb upstream 2000 false chr5: 14434199-14436198 Medicago truncatula
Medtr5g033510 2.0kb downstream 2.0kb downstream 3727 true chr5: 14430472-14434198 Medicago truncatula
Medtr5g033510 2.0kb downstream 2.0kb downstream 2000 false chr5: 14430472-14432471 Medicago truncatula
Medtr5g033510 5.0kb upstream 5.0kb upstream 6727 true chr5: 14432472-14439198 Medicago truncatula
Medtr5g033510 5.0kb upstream 5.0kb upstream 5000 false chr5: 14434199-14439198 Medicago truncatula
Medtr5g033510 5.0kb downstream 5.0kb downstream 6727 true chr5: 14427472-14434198 Medicago truncatula
Medtr5g033510 5.0kb downstream 5.0kb downstream 5000 false chr5: 14427472-14432471 Medicago truncatula
Medtr5g033510 10.0kb upstream 10.0kb upstream 11727 true chr5: 14432472-14444198 Medicago truncatula
Medtr5g033510 10.0kb upstream 10.0kb upstream 10000 false chr5: 14434199-14444198 Medicago truncatula
Medtr5g033510 10.0kb downstream 10.0kb downstream 11727 true chr5: 14422472-14434198 Medicago truncatula
Medtr5g033510 10.0kb downstream 10.0kb downstream 10000 false chr5: 14422472-14432471 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791878 5273 Angiosperm View MSA
122299117 5265 Fabidae View MSA
124063214 5270 Rosid View MSA
123745663 5271 Pentapetalae View MSA
122794997 5272 Eudicot View MSA
121350160 5274 Embryophyte View MSA
123381598 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.85       High
cufflinks 0.073        
cufflinks 0.152        
cufflinks 0.013     Low Low
cufflinks 0.16        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.172        
cufflinks 0.038     Low  

0 Strain