Gene : Medtr5g087450 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11527:SF156 - HEAT SHOCK FAMILY PROTEIN Description:  hsp20/alpha crystallin family protein
Genomic Order:  4921 Name:  ? Medtr5g087450
Secondary Identifier:  ? PAC:31091756
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g087450 0.5kb upstream 0.5kb upstream 1929 true chr5: 37892434-37894362 Medicago truncatula
Medtr5g087450 0.5kb upstream 0.5kb upstream 500 false chr5: 37892434-37892933 Medicago truncatula
Medtr5g087450 0.5kb downstream 0.5kb downstream 1929 true chr5: 37892934-37894862 Medicago truncatula
Medtr5g087450 0.5kb downstream 0.5kb downstream 500 false chr5: 37894363-37894862 Medicago truncatula
Medtr5g087450 1.0kb upstream 1.0kb upstream 2429 true chr5: 37891934-37894362 Medicago truncatula
Medtr5g087450 1.0kb upstream 1.0kb upstream 1000 false chr5: 37891934-37892933 Medicago truncatula
Medtr5g087450 1.0kb downstream 1.0kb downstream 2429 true chr5: 37892934-37895362 Medicago truncatula
Medtr5g087450 1.0kb downstream 1.0kb downstream 1000 false chr5: 37894363-37895362 Medicago truncatula
Medtr5g087450 2.0kb upstream 2.0kb upstream 3429 true chr5: 37890934-37894362 Medicago truncatula
Medtr5g087450 2.0kb upstream 2.0kb upstream 2000 false chr5: 37890934-37892933 Medicago truncatula
Medtr5g087450 2.0kb downstream 2.0kb downstream 3429 true chr5: 37892934-37896362 Medicago truncatula
Medtr5g087450 2.0kb downstream 2.0kb downstream 2000 false chr5: 37894363-37896362 Medicago truncatula
Medtr5g087450 5.0kb upstream 5.0kb upstream 6429 true chr5: 37887934-37894362 Medicago truncatula
Medtr5g087450 5.0kb upstream 5.0kb upstream 5000 false chr5: 37887934-37892933 Medicago truncatula
Medtr5g087450 5.0kb downstream 5.0kb downstream 6429 true chr5: 37892934-37899362 Medicago truncatula
Medtr5g087450 5.0kb downstream 5.0kb downstream 5000 false chr5: 37894363-37899362 Medicago truncatula
Medtr5g087450 10.0kb upstream 10.0kb upstream 11429 true chr5: 37882934-37894362 Medicago truncatula
Medtr5g087450 10.0kb upstream 10.0kb upstream 10000 false chr5: 37882934-37892933 Medicago truncatula
Medtr5g087450 10.0kb downstream 10.0kb downstream 11429 true chr5: 37892934-37904362 Medicago truncatula
Medtr5g087450 10.0kb downstream 10.0kb downstream 10000 false chr5: 37894363-37904362 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296785 5265 Fabidae View MSA
124069899 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.958       Low
cufflinks 6.274        
cufflinks 6.379        
cufflinks 7.304        
cufflinks 6.781        
cufflinks 6.152        
cufflinks 8.49        
cufflinks 6.983        
cufflinks 5.135        

0 Strain