Gene : Medtr5g088140 M. truncatula Mt4.0v1
Defline:  (1 of 16) PTHR31066:SF2 - GB Description:  octicosapeptide/phox/Bem1p (PB1) domain protein
Genomic Order:  4976 Name:  ? Medtr5g088140
Secondary Identifier:  ? PAC:31088807
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g088140 0.5kb upstream 0.5kb upstream 1169 true chr5: 38187616-38188784 Medicago truncatula
Medtr5g088140 0.5kb upstream 0.5kb upstream 500 false chr5: 38187616-38188115 Medicago truncatula
Medtr5g088140 0.5kb downstream 0.5kb downstream 1169 true chr5: 38188116-38189284 Medicago truncatula
Medtr5g088140 0.5kb downstream 0.5kb downstream 500 false chr5: 38188785-38189284 Medicago truncatula
Medtr5g088140 1.0kb upstream 1.0kb upstream 1669 true chr5: 38187116-38188784 Medicago truncatula
Medtr5g088140 1.0kb upstream 1.0kb upstream 1000 false chr5: 38187116-38188115 Medicago truncatula
Medtr5g088140 1.0kb downstream 1.0kb downstream 1669 true chr5: 38188116-38189784 Medicago truncatula
Medtr5g088140 1.0kb downstream 1.0kb downstream 1000 false chr5: 38188785-38189784 Medicago truncatula
Medtr5g088140 2.0kb upstream 2.0kb upstream 2669 true chr5: 38186116-38188784 Medicago truncatula
Medtr5g088140 2.0kb upstream 2.0kb upstream 2000 false chr5: 38186116-38188115 Medicago truncatula
Medtr5g088140 2.0kb downstream 2.0kb downstream 2669 true chr5: 38188116-38190784 Medicago truncatula
Medtr5g088140 2.0kb downstream 2.0kb downstream 2000 false chr5: 38188785-38190784 Medicago truncatula
Medtr5g088140 5.0kb upstream 5.0kb upstream 5669 true chr5: 38183116-38188784 Medicago truncatula
Medtr5g088140 5.0kb upstream 5.0kb upstream 5000 false chr5: 38183116-38188115 Medicago truncatula
Medtr5g088140 5.0kb downstream 5.0kb downstream 5669 true chr5: 38188116-38193784 Medicago truncatula
Medtr5g088140 5.0kb downstream 5.0kb downstream 5000 false chr5: 38188785-38193784 Medicago truncatula
Medtr5g088140 10.0kb upstream 10.0kb upstream 10669 true chr5: 38178116-38188784 Medicago truncatula
Medtr5g088140 10.0kb upstream 10.0kb upstream 10000 false chr5: 38178116-38188115 Medicago truncatula
Medtr5g088140 10.0kb downstream 10.0kb downstream 10669 true chr5: 38188116-38198784 Medicago truncatula
Medtr5g088140 10.0kb downstream 10.0kb downstream 10000 false chr5: 38188785-38198784 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314060 5265 Fabidae View MSA
124073769 5270 Rosid View MSA
123750772 5271 Pentapetalae View MSA
122787571 5272 Eudicot View MSA
122050894 5273 Angiosperm View MSA
121312193 5274 Embryophyte View MSA
123349392 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain