Gene : Medtr5g088270 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR10343:SF51 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 Description:  SNF1-related kinase regulatory beta protein
Genomic Order:  4993 Name:  ? Medtr5g088270
Secondary Identifier:  ? PAC:31087753
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g088270 0.5kb upstream 0.5kb upstream 6193 true chr5: 38284364-38290556 Medicago truncatula
Medtr5g088270 0.5kb upstream 0.5kb upstream 500 false chr5: 38284364-38284863 Medicago truncatula
Medtr5g088270 0.5kb downstream 0.5kb downstream 6193 true chr5: 38284864-38291056 Medicago truncatula
Medtr5g088270 0.5kb downstream 0.5kb downstream 500 false chr5: 38290557-38291056 Medicago truncatula
Medtr5g088270 1.0kb upstream 1.0kb upstream 6693 true chr5: 38283864-38290556 Medicago truncatula
Medtr5g088270 1.0kb upstream 1.0kb upstream 1000 false chr5: 38283864-38284863 Medicago truncatula
Medtr5g088270 1.0kb downstream 1.0kb downstream 6693 true chr5: 38284864-38291556 Medicago truncatula
Medtr5g088270 1.0kb downstream 1.0kb downstream 1000 false chr5: 38290557-38291556 Medicago truncatula
Medtr5g088270 2.0kb upstream 2.0kb upstream 7693 true chr5: 38282864-38290556 Medicago truncatula
Medtr5g088270 2.0kb upstream 2.0kb upstream 2000 false chr5: 38282864-38284863 Medicago truncatula
Medtr5g088270 2.0kb downstream 2.0kb downstream 7693 true chr5: 38284864-38292556 Medicago truncatula
Medtr5g088270 2.0kb downstream 2.0kb downstream 2000 false chr5: 38290557-38292556 Medicago truncatula
Medtr5g088270 5.0kb upstream 5.0kb upstream 10693 true chr5: 38279864-38290556 Medicago truncatula
Medtr5g088270 5.0kb upstream 5.0kb upstream 5000 false chr5: 38279864-38284863 Medicago truncatula
Medtr5g088270 5.0kb downstream 5.0kb downstream 10693 true chr5: 38284864-38295556 Medicago truncatula
Medtr5g088270 5.0kb downstream 5.0kb downstream 5000 false chr5: 38290557-38295556 Medicago truncatula
Medtr5g088270 10.0kb upstream 10.0kb upstream 15693 true chr5: 38274864-38290556 Medicago truncatula
Medtr5g088270 10.0kb upstream 10.0kb upstream 10000 false chr5: 38274864-38284863 Medicago truncatula
Medtr5g088270 10.0kb downstream 10.0kb downstream 15693 true chr5: 38284864-38300556 Medicago truncatula
Medtr5g088270 10.0kb downstream 10.0kb downstream 10000 false chr5: 38290557-38300556 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314668 5265 Fabidae View MSA
124068793 5270 Rosid View MSA
123737667 5271 Pentapetalae View MSA
122785894 5272 Eudicot View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.279     High  
cufflinks 12.682     High  
cufflinks 21.605     High  
cufflinks 73.006     High High
cufflinks 7.854       Low
cufflinks 111.344     High High
cufflinks 29.259     High  
cufflinks 19.237     High  
cufflinks 26.622     High  

0 Strain