Gene : Medtr5g090120 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24031:SF326 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 53-RELATED Description:  DEAD-box ATP-dependent RNA helicase-like protein
Genomic Order:  5132 Name:  ? Medtr5g090120
Secondary Identifier:  ? PAC:31090429
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g090120 0.5kb upstream 0.5kb upstream 5730 true chr5: 39246584-39252313 Medicago truncatula
Medtr5g090120 0.5kb upstream 0.5kb upstream 500 false chr5: 39246584-39247083 Medicago truncatula
Medtr5g090120 0.5kb downstream 0.5kb downstream 5730 true chr5: 39247084-39252813 Medicago truncatula
Medtr5g090120 0.5kb downstream 0.5kb downstream 500 false chr5: 39252314-39252813 Medicago truncatula
Medtr5g090120 1.0kb upstream 1.0kb upstream 6230 true chr5: 39246084-39252313 Medicago truncatula
Medtr5g090120 1.0kb upstream 1.0kb upstream 1000 false chr5: 39246084-39247083 Medicago truncatula
Medtr5g090120 1.0kb downstream 1.0kb downstream 6230 true chr5: 39247084-39253313 Medicago truncatula
Medtr5g090120 1.0kb downstream 1.0kb downstream 1000 false chr5: 39252314-39253313 Medicago truncatula
Medtr5g090120 2.0kb upstream 2.0kb upstream 7230 true chr5: 39245084-39252313 Medicago truncatula
Medtr5g090120 2.0kb upstream 2.0kb upstream 2000 false chr5: 39245084-39247083 Medicago truncatula
Medtr5g090120 2.0kb downstream 2.0kb downstream 7230 true chr5: 39247084-39254313 Medicago truncatula
Medtr5g090120 2.0kb downstream 2.0kb downstream 2000 false chr5: 39252314-39254313 Medicago truncatula
Medtr5g090120 5.0kb upstream 5.0kb upstream 10230 true chr5: 39242084-39252313 Medicago truncatula
Medtr5g090120 5.0kb upstream 5.0kb upstream 5000 false chr5: 39242084-39247083 Medicago truncatula
Medtr5g090120 5.0kb downstream 5.0kb downstream 10230 true chr5: 39247084-39257313 Medicago truncatula
Medtr5g090120 5.0kb downstream 5.0kb downstream 5000 false chr5: 39252314-39257313 Medicago truncatula
Medtr5g090120 10.0kb upstream 10.0kb upstream 15230 true chr5: 39237084-39252313 Medicago truncatula
Medtr5g090120 10.0kb upstream 10.0kb upstream 10000 false chr5: 39237084-39247083 Medicago truncatula
Medtr5g090120 10.0kb downstream 10.0kb downstream 15230 true chr5: 39247084-39262313 Medicago truncatula
Medtr5g090120 10.0kb downstream 10.0kb downstream 10000 false chr5: 39252314-39262313 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300016 5265 Fabidae View MSA
124062344 5270 Rosid View MSA
123751668 5271 Pentapetalae View MSA
122790470 5272 Eudicot View MSA
122044594 5273 Angiosperm View MSA
121310318 5274 Embryophyte View MSA
123426449 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.693     High  
cufflinks 7.434        
cufflinks 13.271     High  
cufflinks 8.599        
cufflinks 19.589     High High
cufflinks 3.591       Low
cufflinks 7.826        
cufflinks 9.898     High  
cufflinks 8.299        

0 Strain