Gene : Medtr5g088337 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11046 - OLIGORIBONUCLEASE, MITOCHONDRIAL Description:  ribonuclease H superfamily polynucleotidyl transferase
Genomic Order:  5001 Name:  ? Medtr5g088337
Secondary Identifier:  ? PAC:31089504
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g088337 0.5kb upstream 0.5kb upstream 4834 true chr5: 38329013-38333846 Medicago truncatula
Medtr5g088337 0.5kb upstream 0.5kb upstream 500 false chr5: 38329013-38329512 Medicago truncatula
Medtr5g088337 0.5kb downstream 0.5kb downstream 4834 true chr5: 38329513-38334346 Medicago truncatula
Medtr5g088337 0.5kb downstream 0.5kb downstream 500 false chr5: 38333847-38334346 Medicago truncatula
Medtr5g088337 1.0kb upstream 1.0kb upstream 5334 true chr5: 38328513-38333846 Medicago truncatula
Medtr5g088337 1.0kb upstream 1.0kb upstream 1000 false chr5: 38328513-38329512 Medicago truncatula
Medtr5g088337 1.0kb downstream 1.0kb downstream 5334 true chr5: 38329513-38334846 Medicago truncatula
Medtr5g088337 1.0kb downstream 1.0kb downstream 1000 false chr5: 38333847-38334846 Medicago truncatula
Medtr5g088337 2.0kb upstream 2.0kb upstream 6334 true chr5: 38327513-38333846 Medicago truncatula
Medtr5g088337 2.0kb upstream 2.0kb upstream 2000 false chr5: 38327513-38329512 Medicago truncatula
Medtr5g088337 2.0kb downstream 2.0kb downstream 6334 true chr5: 38329513-38335846 Medicago truncatula
Medtr5g088337 2.0kb downstream 2.0kb downstream 2000 false chr5: 38333847-38335846 Medicago truncatula
Medtr5g088337 5.0kb upstream 5.0kb upstream 9334 true chr5: 38324513-38333846 Medicago truncatula
Medtr5g088337 5.0kb upstream 5.0kb upstream 5000 false chr5: 38324513-38329512 Medicago truncatula
Medtr5g088337 5.0kb downstream 5.0kb downstream 9334 true chr5: 38329513-38338846 Medicago truncatula
Medtr5g088337 5.0kb downstream 5.0kb downstream 5000 false chr5: 38333847-38338846 Medicago truncatula
Medtr5g088337 10.0kb upstream 10.0kb upstream 14334 true chr5: 38319513-38333846 Medicago truncatula
Medtr5g088337 10.0kb upstream 10.0kb upstream 10000 false chr5: 38319513-38329512 Medicago truncatula
Medtr5g088337 10.0kb downstream 10.0kb downstream 14334 true chr5: 38329513-38343846 Medicago truncatula
Medtr5g088337 10.0kb downstream 10.0kb downstream 10000 false chr5: 38333847-38343846 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300743 5265 Fabidae View MSA
124062550 5270 Rosid View MSA
123741047 5271 Pentapetalae View MSA
122789604 5272 Eudicot View MSA
122046409 5273 Angiosperm View MSA
121344784 5274 Embryophyte View MSA
123423966 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.986        
cufflinks 1.796        
cufflinks 1.791        
cufflinks 0.687       Low
cufflinks 2.082        
cufflinks 0.545       Low
cufflinks 1.245        
cufflinks 1.649        
cufflinks 0.586       Low

0 Strain