Gene : Medtr5g090340 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10994:SF62 - RETICULON-LIKE PROTEIN B8 Description:  reticulon-like protein B2
Genomic Order:  5150 Name:  ? Medtr5g090340
Secondary Identifier:  ? PAC:31085598
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g090340 0.5kb upstream 0.5kb upstream 4329 true chr5: 39339732-39344060 Medicago truncatula
Medtr5g090340 0.5kb upstream 0.5kb upstream 500 false chr5: 39343561-39344060 Medicago truncatula
Medtr5g090340 0.5kb downstream 0.5kb downstream 4329 true chr5: 39339232-39343560 Medicago truncatula
Medtr5g090340 0.5kb downstream 0.5kb downstream 500 false chr5: 39339232-39339731 Medicago truncatula
Medtr5g090340 1.0kb upstream 1.0kb upstream 4829 true chr5: 39339732-39344560 Medicago truncatula
Medtr5g090340 1.0kb upstream 1.0kb upstream 1000 false chr5: 39343561-39344560 Medicago truncatula
Medtr5g090340 1.0kb downstream 1.0kb downstream 4829 true chr5: 39338732-39343560 Medicago truncatula
Medtr5g090340 1.0kb downstream 1.0kb downstream 1000 false chr5: 39338732-39339731 Medicago truncatula
Medtr5g090340 2.0kb upstream 2.0kb upstream 5829 true chr5: 39339732-39345560 Medicago truncatula
Medtr5g090340 2.0kb upstream 2.0kb upstream 2000 false chr5: 39343561-39345560 Medicago truncatula
Medtr5g090340 2.0kb downstream 2.0kb downstream 5829 true chr5: 39337732-39343560 Medicago truncatula
Medtr5g090340 2.0kb downstream 2.0kb downstream 2000 false chr5: 39337732-39339731 Medicago truncatula
Medtr5g090340 5.0kb upstream 5.0kb upstream 8829 true chr5: 39339732-39348560 Medicago truncatula
Medtr5g090340 5.0kb upstream 5.0kb upstream 5000 false chr5: 39343561-39348560 Medicago truncatula
Medtr5g090340 5.0kb downstream 5.0kb downstream 8829 true chr5: 39334732-39343560 Medicago truncatula
Medtr5g090340 5.0kb downstream 5.0kb downstream 5000 false chr5: 39334732-39339731 Medicago truncatula
Medtr5g090340 10.0kb upstream 10.0kb upstream 13829 true chr5: 39339732-39353560 Medicago truncatula
Medtr5g090340 10.0kb upstream 10.0kb upstream 10000 false chr5: 39343561-39353560 Medicago truncatula
Medtr5g090340 10.0kb downstream 10.0kb downstream 13829 true chr5: 39329732-39343560 Medicago truncatula
Medtr5g090340 10.0kb downstream 10.0kb downstream 10000 false chr5: 39329732-39339731 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310765 5265 Fabidae View MSA
124061075 5270 Rosid View MSA
123740052 5271 Pentapetalae View MSA
122787995 5272 Eudicot View MSA
122045587 5273 Angiosperm View MSA
121310470 5274 Embryophyte View MSA
123347943 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.027       High
cufflinks 1.557        
cufflinks 1.642        
cufflinks 1.386        
cufflinks 1.933        
cufflinks 0.567       Low
cufflinks 0.718       Low
cufflinks 1.433        
cufflinks 1.086        

0 Strain