Gene : Medtr5g091710 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR18937//PTHR18937:SF242 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER Description:  tropomyosin-like protein, putative
Genomic Order:  5256 Name:  ? Medtr5g091710
Secondary Identifier:  ? PAC:31085914
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g091710 0.5kb upstream 0.5kb upstream 3172 true chr5: 40018089-40021260 Medicago truncatula
Medtr5g091710 0.5kb upstream 0.5kb upstream 500 false chr5: 40018089-40018588 Medicago truncatula
Medtr5g091710 0.5kb downstream 0.5kb downstream 3172 true chr5: 40018589-40021760 Medicago truncatula
Medtr5g091710 0.5kb downstream 0.5kb downstream 500 false chr5: 40021261-40021760 Medicago truncatula
Medtr5g091710 1.0kb upstream 1.0kb upstream 3672 true chr5: 40017589-40021260 Medicago truncatula
Medtr5g091710 1.0kb upstream 1.0kb upstream 1000 false chr5: 40017589-40018588 Medicago truncatula
Medtr5g091710 1.0kb downstream 1.0kb downstream 3672 true chr5: 40018589-40022260 Medicago truncatula
Medtr5g091710 1.0kb downstream 1.0kb downstream 1000 false chr5: 40021261-40022260 Medicago truncatula
Medtr5g091710 2.0kb upstream 2.0kb upstream 4672 true chr5: 40016589-40021260 Medicago truncatula
Medtr5g091710 2.0kb upstream 2.0kb upstream 2000 false chr5: 40016589-40018588 Medicago truncatula
Medtr5g091710 2.0kb downstream 2.0kb downstream 4672 true chr5: 40018589-40023260 Medicago truncatula
Medtr5g091710 2.0kb downstream 2.0kb downstream 2000 false chr5: 40021261-40023260 Medicago truncatula
Medtr5g091710 5.0kb upstream 5.0kb upstream 7672 true chr5: 40013589-40021260 Medicago truncatula
Medtr5g091710 5.0kb upstream 5.0kb upstream 5000 false chr5: 40013589-40018588 Medicago truncatula
Medtr5g091710 5.0kb downstream 5.0kb downstream 7672 true chr5: 40018589-40026260 Medicago truncatula
Medtr5g091710 5.0kb downstream 5.0kb downstream 5000 false chr5: 40021261-40026260 Medicago truncatula
Medtr5g091710 10.0kb upstream 10.0kb upstream 12672 true chr5: 40008589-40021260 Medicago truncatula
Medtr5g091710 10.0kb upstream 10.0kb upstream 10000 false chr5: 40008589-40018588 Medicago truncatula
Medtr5g091710 10.0kb downstream 10.0kb downstream 12672 true chr5: 40018589-40031260 Medicago truncatula
Medtr5g091710 10.0kb downstream 10.0kb downstream 10000 false chr5: 40021261-40031260 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302552 5265 Fabidae View MSA
124068005 5270 Rosid View MSA
123750938 5271 Pentapetalae View MSA
122794865 5272 Eudicot View MSA
122042707 5273 Angiosperm View MSA
121310005 5274 Embryophyte View MSA
123347612 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.81     High  
cufflinks 30.972     High  
cufflinks 29.92     High  
cufflinks 15.528     High  
cufflinks 40.289     High High
cufflinks 9.625       Low
cufflinks 20.201     High  
cufflinks 30.276     High  
cufflinks 19.826     High  

0 Strain