Gene : Medtr5g093840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13773:SF10 - PHOSPHATIDATE CYTIDYLYLTRANSFERASE Description:  phosphatidate cytidylyltransferase family protein
Genomic Order:  5411 Name:  ? Medtr5g093840
Secondary Identifier:  ? PAC:31088301
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-1319 Medicago truncatula pathologic  
Mtruncatula PWY4FS-7 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g093840 0.5kb upstream 0.5kb upstream 3103 true chr5: 40967574-40970676 Medicago truncatula
Medtr5g093840 0.5kb upstream 0.5kb upstream 500 false chr5: 40970177-40970676 Medicago truncatula
Medtr5g093840 0.5kb downstream 0.5kb downstream 3103 true chr5: 40967074-40970176 Medicago truncatula
Medtr5g093840 0.5kb downstream 0.5kb downstream 500 false chr5: 40967074-40967573 Medicago truncatula
Medtr5g093840 1.0kb upstream 1.0kb upstream 3603 true chr5: 40967574-40971176 Medicago truncatula
Medtr5g093840 1.0kb upstream 1.0kb upstream 1000 false chr5: 40970177-40971176 Medicago truncatula
Medtr5g093840 1.0kb downstream 1.0kb downstream 3603 true chr5: 40966574-40970176 Medicago truncatula
Medtr5g093840 1.0kb downstream 1.0kb downstream 1000 false chr5: 40966574-40967573 Medicago truncatula
Medtr5g093840 2.0kb upstream 2.0kb upstream 4603 true chr5: 40967574-40972176 Medicago truncatula
Medtr5g093840 2.0kb upstream 2.0kb upstream 2000 false chr5: 40970177-40972176 Medicago truncatula
Medtr5g093840 2.0kb downstream 2.0kb downstream 4603 true chr5: 40965574-40970176 Medicago truncatula
Medtr5g093840 2.0kb downstream 2.0kb downstream 2000 false chr5: 40965574-40967573 Medicago truncatula
Medtr5g093840 5.0kb upstream 5.0kb upstream 7603 true chr5: 40967574-40975176 Medicago truncatula
Medtr5g093840 5.0kb upstream 5.0kb upstream 5000 false chr5: 40970177-40975176 Medicago truncatula
Medtr5g093840 5.0kb downstream 5.0kb downstream 7603 true chr5: 40962574-40970176 Medicago truncatula
Medtr5g093840 5.0kb downstream 5.0kb downstream 5000 false chr5: 40962574-40967573 Medicago truncatula
Medtr5g093840 10.0kb upstream 10.0kb upstream 12603 true chr5: 40967574-40980176 Medicago truncatula
Medtr5g093840 10.0kb upstream 10.0kb upstream 10000 false chr5: 40970177-40980176 Medicago truncatula
Medtr5g093840 10.0kb downstream 10.0kb downstream 12603 true chr5: 40957574-40970176 Medicago truncatula
Medtr5g093840 10.0kb downstream 10.0kb downstream 10000 false chr5: 40957574-40967573 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296786 5265 Fabidae View MSA
124063669 5270 Rosid View MSA
123751234 5271 Pentapetalae View MSA
122787509 5272 Eudicot View MSA
122045670 5273 Angiosperm View MSA
121346295 5274 Embryophyte View MSA
123428107 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.006     Low Low
cufflinks 0.005     Low Low
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.029     Low  
cufflinks 0.068     Low High

0 Strain