Gene : Medtr5g082660 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12210:SF57 - HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN Description:  NLI interacting factor-like phosphatase
Genomic Order:  4594 Name:  ? Medtr5g082660
Secondary Identifier:  ? PAC:31088268
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g082660 0.5kb upstream 0.5kb upstream 5484 true chr5: 35571911-35577394 Medicago truncatula
Medtr5g082660 0.5kb upstream 0.5kb upstream 500 false chr5: 35576895-35577394 Medicago truncatula
Medtr5g082660 0.5kb downstream 0.5kb downstream 5484 true chr5: 35571411-35576894 Medicago truncatula
Medtr5g082660 0.5kb downstream 0.5kb downstream 500 false chr5: 35571411-35571910 Medicago truncatula
Medtr5g082660 1.0kb upstream 1.0kb upstream 5984 true chr5: 35571911-35577894 Medicago truncatula
Medtr5g082660 1.0kb upstream 1.0kb upstream 1000 false chr5: 35576895-35577894 Medicago truncatula
Medtr5g082660 1.0kb downstream 1.0kb downstream 5984 true chr5: 35570911-35576894 Medicago truncatula
Medtr5g082660 1.0kb downstream 1.0kb downstream 1000 false chr5: 35570911-35571910 Medicago truncatula
Medtr5g082660 2.0kb upstream 2.0kb upstream 6984 true chr5: 35571911-35578894 Medicago truncatula
Medtr5g082660 2.0kb upstream 2.0kb upstream 2000 false chr5: 35576895-35578894 Medicago truncatula
Medtr5g082660 2.0kb downstream 2.0kb downstream 6984 true chr5: 35569911-35576894 Medicago truncatula
Medtr5g082660 2.0kb downstream 2.0kb downstream 2000 false chr5: 35569911-35571910 Medicago truncatula
Medtr5g082660 5.0kb upstream 5.0kb upstream 9984 true chr5: 35571911-35581894 Medicago truncatula
Medtr5g082660 5.0kb upstream 5.0kb upstream 5000 false chr5: 35576895-35581894 Medicago truncatula
Medtr5g082660 5.0kb downstream 5.0kb downstream 9984 true chr5: 35566911-35576894 Medicago truncatula
Medtr5g082660 5.0kb downstream 5.0kb downstream 5000 false chr5: 35566911-35571910 Medicago truncatula
Medtr5g082660 10.0kb upstream 10.0kb upstream 14984 true chr5: 35571911-35586894 Medicago truncatula
Medtr5g082660 10.0kb upstream 10.0kb upstream 10000 false chr5: 35576895-35586894 Medicago truncatula
Medtr5g082660 10.0kb downstream 10.0kb downstream 14984 true chr5: 35561911-35576894 Medicago truncatula
Medtr5g082660 10.0kb downstream 10.0kb downstream 10000 false chr5: 35561911-35571910 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304199 5265 Fabidae View MSA
124073385 5270 Rosid View MSA
123737180 5271 Pentapetalae View MSA
122791950 5272 Eudicot View MSA
122050524 5273 Angiosperm View MSA
123429149 5275 Viridiplantae View MSA
121311967 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.446       Low
cufflinks 8.306        
cufflinks 6.984        
cufflinks 17.202     High High
cufflinks 5.725        
cufflinks 7.448        
cufflinks 8.827        
cufflinks 6.19        
cufflinks 8.269        

0 Strain