Gene : Medtr5g082570 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13711//PTHR13711:SF199 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN Description:  FACT complex subunit SSRP1
Genomic Order:  4588 Name:  ? Medtr5g082570
Secondary Identifier:  ? PAC:31090133
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g082570 0.5kb upstream 0.5kb upstream 5988 true chr5: 35497078-35503065 Medicago truncatula
Medtr5g082570 0.5kb upstream 0.5kb upstream 500 false chr5: 35502566-35503065 Medicago truncatula
Medtr5g082570 0.5kb downstream 0.5kb downstream 5988 true chr5: 35496578-35502565 Medicago truncatula
Medtr5g082570 0.5kb downstream 0.5kb downstream 500 false chr5: 35496578-35497077 Medicago truncatula
Medtr5g082570 1.0kb upstream 1.0kb upstream 6488 true chr5: 35497078-35503565 Medicago truncatula
Medtr5g082570 1.0kb upstream 1.0kb upstream 1000 false chr5: 35502566-35503565 Medicago truncatula
Medtr5g082570 1.0kb downstream 1.0kb downstream 6488 true chr5: 35496078-35502565 Medicago truncatula
Medtr5g082570 1.0kb downstream 1.0kb downstream 1000 false chr5: 35496078-35497077 Medicago truncatula
Medtr5g082570 2.0kb upstream 2.0kb upstream 7488 true chr5: 35497078-35504565 Medicago truncatula
Medtr5g082570 2.0kb upstream 2.0kb upstream 2000 false chr5: 35502566-35504565 Medicago truncatula
Medtr5g082570 2.0kb downstream 2.0kb downstream 7488 true chr5: 35495078-35502565 Medicago truncatula
Medtr5g082570 2.0kb downstream 2.0kb downstream 2000 false chr5: 35495078-35497077 Medicago truncatula
Medtr5g082570 5.0kb upstream 5.0kb upstream 10488 true chr5: 35497078-35507565 Medicago truncatula
Medtr5g082570 5.0kb upstream 5.0kb upstream 5000 false chr5: 35502566-35507565 Medicago truncatula
Medtr5g082570 5.0kb downstream 5.0kb downstream 10488 true chr5: 35492078-35502565 Medicago truncatula
Medtr5g082570 5.0kb downstream 5.0kb downstream 5000 false chr5: 35492078-35497077 Medicago truncatula
Medtr5g082570 10.0kb upstream 10.0kb upstream 15488 true chr5: 35497078-35512565 Medicago truncatula
Medtr5g082570 10.0kb upstream 10.0kb upstream 10000 false chr5: 35502566-35512565 Medicago truncatula
Medtr5g082570 10.0kb downstream 10.0kb downstream 15488 true chr5: 35487078-35502565 Medicago truncatula
Medtr5g082570 10.0kb downstream 10.0kb downstream 10000 false chr5: 35487078-35497077 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122287941 5265 Fabidae View MSA
124060640 5270 Rosid View MSA
123744635 5271 Pentapetalae View MSA
122790158 5272 Eudicot View MSA
122041570 5273 Angiosperm View MSA
121347609 5274 Embryophyte View MSA
123424150 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.172       High
cufflinks 1.563        
cufflinks 1.479        
cufflinks 0.644       Low
cufflinks 2.193       High
cufflinks 0.93        
cufflinks 1.254        
cufflinks 1.192        
cufflinks 1.349        

0 Strain