Gene : Medtr5g084460 M. truncatula Mt4.0v1
Defline:  (1 of 8) PF07172 - Glycine rich protein family (GRP) Description:  hypothetical protein
Genomic Order:  4726 Name:  ? Medtr5g084460
Secondary Identifier:  ? PAC:31090699
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g084460 0.5kb upstream 0.5kb upstream 1987 true chr5: 36435376-36437362 Medicago truncatula
Medtr5g084460 0.5kb upstream 0.5kb upstream 500 false chr5: 36436863-36437362 Medicago truncatula
Medtr5g084460 0.5kb downstream 0.5kb downstream 1987 true chr5: 36434876-36436862 Medicago truncatula
Medtr5g084460 0.5kb downstream 0.5kb downstream 500 false chr5: 36434876-36435375 Medicago truncatula
Medtr5g084460 1.0kb upstream 1.0kb upstream 2487 true chr5: 36435376-36437862 Medicago truncatula
Medtr5g084460 1.0kb upstream 1.0kb upstream 1000 false chr5: 36436863-36437862 Medicago truncatula
Medtr5g084460 1.0kb downstream 1.0kb downstream 2487 true chr5: 36434376-36436862 Medicago truncatula
Medtr5g084460 1.0kb downstream 1.0kb downstream 1000 false chr5: 36434376-36435375 Medicago truncatula
Medtr5g084460 2.0kb upstream 2.0kb upstream 3487 true chr5: 36435376-36438862 Medicago truncatula
Medtr5g084460 2.0kb upstream 2.0kb upstream 2000 false chr5: 36436863-36438862 Medicago truncatula
Medtr5g084460 2.0kb downstream 2.0kb downstream 3487 true chr5: 36433376-36436862 Medicago truncatula
Medtr5g084460 2.0kb downstream 2.0kb downstream 2000 false chr5: 36433376-36435375 Medicago truncatula
Medtr5g084460 5.0kb upstream 5.0kb upstream 6487 true chr5: 36435376-36441862 Medicago truncatula
Medtr5g084460 5.0kb upstream 5.0kb upstream 5000 false chr5: 36436863-36441862 Medicago truncatula
Medtr5g084460 5.0kb downstream 5.0kb downstream 6487 true chr5: 36430376-36436862 Medicago truncatula
Medtr5g084460 5.0kb downstream 5.0kb downstream 5000 false chr5: 36430376-36435375 Medicago truncatula
Medtr5g084460 10.0kb upstream 10.0kb upstream 11487 true chr5: 36435376-36446862 Medicago truncatula
Medtr5g084460 10.0kb upstream 10.0kb upstream 10000 false chr5: 36436863-36446862 Medicago truncatula
Medtr5g084460 10.0kb downstream 10.0kb downstream 11487 true chr5: 36425376-36436862 Medicago truncatula
Medtr5g084460 10.0kb downstream 10.0kb downstream 10000 false chr5: 36425376-36435375 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315286 5265 Fabidae View MSA
124073083 5270 Rosid View MSA
123750228 5271 Pentapetalae View MSA
122798200 5272 Eudicot View MSA
122051270 5273 Angiosperm View MSA
121312387 5274 Embryophyte View MSA
123349563 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.038     Low Low
cufflinks 1214.36     High  
cufflinks 1044.13     High  
cufflinks 0.242        
cufflinks 765.956     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.287        
cufflinks 1071.623     High  
cufflinks 0.06     Low Low

0 Strain