Gene : Medtr5g081900 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13085 - MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNIT Description:  microsomal signal peptidase 25 kDa subunit
Genomic Order:  4541 Name:  ? Medtr5g081900
Secondary Identifier:  ? PAC:31091215
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g081900 0.5kb upstream 0.5kb upstream 3398 true chr5: 35127667-35131064 Medicago truncatula
Medtr5g081900 0.5kb upstream 0.5kb upstream 500 false chr5: 35130565-35131064 Medicago truncatula
Medtr5g081900 0.5kb downstream 0.5kb downstream 3398 true chr5: 35127167-35130564 Medicago truncatula
Medtr5g081900 0.5kb downstream 0.5kb downstream 500 false chr5: 35127167-35127666 Medicago truncatula
Medtr5g081900 1.0kb upstream 1.0kb upstream 3898 true chr5: 35127667-35131564 Medicago truncatula
Medtr5g081900 1.0kb upstream 1.0kb upstream 1000 false chr5: 35130565-35131564 Medicago truncatula
Medtr5g081900 1.0kb downstream 1.0kb downstream 3898 true chr5: 35126667-35130564 Medicago truncatula
Medtr5g081900 1.0kb downstream 1.0kb downstream 1000 false chr5: 35126667-35127666 Medicago truncatula
Medtr5g081900 2.0kb upstream 2.0kb upstream 4898 true chr5: 35127667-35132564 Medicago truncatula
Medtr5g081900 2.0kb upstream 2.0kb upstream 2000 false chr5: 35130565-35132564 Medicago truncatula
Medtr5g081900 2.0kb downstream 2.0kb downstream 4898 true chr5: 35125667-35130564 Medicago truncatula
Medtr5g081900 2.0kb downstream 2.0kb downstream 2000 false chr5: 35125667-35127666 Medicago truncatula
Medtr5g081900 5.0kb upstream 5.0kb upstream 7898 true chr5: 35127667-35135564 Medicago truncatula
Medtr5g081900 5.0kb upstream 5.0kb upstream 5000 false chr5: 35130565-35135564 Medicago truncatula
Medtr5g081900 5.0kb downstream 5.0kb downstream 7898 true chr5: 35122667-35130564 Medicago truncatula
Medtr5g081900 5.0kb downstream 5.0kb downstream 5000 false chr5: 35122667-35127666 Medicago truncatula
Medtr5g081900 10.0kb upstream 10.0kb upstream 12898 true chr5: 35127667-35140564 Medicago truncatula
Medtr5g081900 10.0kb upstream 10.0kb upstream 10000 false chr5: 35130565-35140564 Medicago truncatula
Medtr5g081900 10.0kb downstream 10.0kb downstream 12898 true chr5: 35117667-35130564 Medicago truncatula
Medtr5g081900 10.0kb downstream 10.0kb downstream 10000 false chr5: 35117667-35127666 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027419 5273 Angiosperm View MSA
122300337 5265 Fabidae View MSA
124061529 5270 Rosid View MSA
123748543 5271 Pentapetalae View MSA
122794037 5272 Eudicot View MSA
121346434 5274 Embryophyte View MSA
123428371 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.187     High High
cufflinks 7.069        
cufflinks 4.618        
cufflinks 9.65     High  
cufflinks 7.367        
cufflinks 4.067        
cufflinks 10.479     High  
cufflinks 4.577        
cufflinks 9.023        

0 Strain