Gene : Medtr5g086300 M. truncatula Mt4.0v1
Defline:  (1 of 94) PF03140 - Plant protein of unknown function (DUF247) Description:  DUF247 domain protein
Genomic Order:  4857 Name:  ? Medtr5g086300
Secondary Identifier:  ? PAC:31085322
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g086300 0.5kb upstream 0.5kb upstream 1550 true chr5: 37303953-37305502 Medicago truncatula
Medtr5g086300 0.5kb upstream 0.5kb upstream 500 false chr5: 37303953-37304452 Medicago truncatula
Medtr5g086300 0.5kb downstream 0.5kb downstream 1550 true chr5: 37304453-37306002 Medicago truncatula
Medtr5g086300 0.5kb downstream 0.5kb downstream 500 false chr5: 37305503-37306002 Medicago truncatula
Medtr5g086300 1.0kb upstream 1.0kb upstream 2050 true chr5: 37303453-37305502 Medicago truncatula
Medtr5g086300 1.0kb upstream 1.0kb upstream 1000 false chr5: 37303453-37304452 Medicago truncatula
Medtr5g086300 1.0kb downstream 1.0kb downstream 2050 true chr5: 37304453-37306502 Medicago truncatula
Medtr5g086300 1.0kb downstream 1.0kb downstream 1000 false chr5: 37305503-37306502 Medicago truncatula
Medtr5g086300 2.0kb upstream 2.0kb upstream 3050 true chr5: 37302453-37305502 Medicago truncatula
Medtr5g086300 2.0kb upstream 2.0kb upstream 2000 false chr5: 37302453-37304452 Medicago truncatula
Medtr5g086300 2.0kb downstream 2.0kb downstream 3050 true chr5: 37304453-37307502 Medicago truncatula
Medtr5g086300 2.0kb downstream 2.0kb downstream 2000 false chr5: 37305503-37307502 Medicago truncatula
Medtr5g086300 5.0kb upstream 5.0kb upstream 6050 true chr5: 37299453-37305502 Medicago truncatula
Medtr5g086300 5.0kb upstream 5.0kb upstream 5000 false chr5: 37299453-37304452 Medicago truncatula
Medtr5g086300 5.0kb downstream 5.0kb downstream 6050 true chr5: 37304453-37310502 Medicago truncatula
Medtr5g086300 5.0kb downstream 5.0kb downstream 5000 false chr5: 37305503-37310502 Medicago truncatula
Medtr5g086300 10.0kb upstream 10.0kb upstream 11050 true chr5: 37294453-37305502 Medicago truncatula
Medtr5g086300 10.0kb upstream 10.0kb upstream 10000 false chr5: 37294453-37304452 Medicago truncatula
Medtr5g086300 10.0kb downstream 10.0kb downstream 11050 true chr5: 37304453-37315502 Medicago truncatula
Medtr5g086300 10.0kb downstream 10.0kb downstream 10000 false chr5: 37305503-37315502 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121657490 5273 Angiosperm View MSA
122263301 5265 Fabidae Singleton cluster - no MSA
124039392 5270 Rosid View MSA
123611293 5271 Pentapetalae View MSA
122645864 5272 Eudicot View MSA
120929531 5274 Embryophyte View MSA
122970089 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain