Gene : Medtr5g082180 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG0815 - 60S acidic ribosomal protein P0 Description:  60S acidic ribosomal protein P0-1
Genomic Order:  4561 Name:  ? Medtr5g082180
Secondary Identifier:  ? PAC:31087597
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g082180 0.5kb upstream 0.5kb upstream 3591 true chr5: 35298120-35301710 Medicago truncatula
Medtr5g082180 0.5kb upstream 0.5kb upstream 500 false chr5: 35301211-35301710 Medicago truncatula
Medtr5g082180 0.5kb downstream 0.5kb downstream 3591 true chr5: 35297620-35301210 Medicago truncatula
Medtr5g082180 0.5kb downstream 0.5kb downstream 500 false chr5: 35297620-35298119 Medicago truncatula
Medtr5g082180 1.0kb upstream 1.0kb upstream 4091 true chr5: 35298120-35302210 Medicago truncatula
Medtr5g082180 1.0kb upstream 1.0kb upstream 1000 false chr5: 35301211-35302210 Medicago truncatula
Medtr5g082180 1.0kb downstream 1.0kb downstream 4091 true chr5: 35297120-35301210 Medicago truncatula
Medtr5g082180 1.0kb downstream 1.0kb downstream 1000 false chr5: 35297120-35298119 Medicago truncatula
Medtr5g082180 2.0kb upstream 2.0kb upstream 5091 true chr5: 35298120-35303210 Medicago truncatula
Medtr5g082180 2.0kb upstream 2.0kb upstream 2000 false chr5: 35301211-35303210 Medicago truncatula
Medtr5g082180 2.0kb downstream 2.0kb downstream 5091 true chr5: 35296120-35301210 Medicago truncatula
Medtr5g082180 2.0kb downstream 2.0kb downstream 2000 false chr5: 35296120-35298119 Medicago truncatula
Medtr5g082180 5.0kb upstream 5.0kb upstream 8091 true chr5: 35298120-35306210 Medicago truncatula
Medtr5g082180 5.0kb upstream 5.0kb upstream 5000 false chr5: 35301211-35306210 Medicago truncatula
Medtr5g082180 5.0kb downstream 5.0kb downstream 8091 true chr5: 35293120-35301210 Medicago truncatula
Medtr5g082180 5.0kb downstream 5.0kb downstream 5000 false chr5: 35293120-35298119 Medicago truncatula
Medtr5g082180 10.0kb upstream 10.0kb upstream 13091 true chr5: 35298120-35311210 Medicago truncatula
Medtr5g082180 10.0kb upstream 10.0kb upstream 10000 false chr5: 35301211-35311210 Medicago truncatula
Medtr5g082180 10.0kb downstream 10.0kb downstream 13091 true chr5: 35288120-35301210 Medicago truncatula
Medtr5g082180 10.0kb downstream 10.0kb downstream 10000 false chr5: 35288120-35298119 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306740 5265 Fabidae View MSA
124061567 5270 Rosid View MSA
123747108 5271 Pentapetalae View MSA
122786385 5272 Eudicot View MSA
122042027 5273 Angiosperm View MSA
121345246 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.995     High Low
cufflinks 35.423     High  
cufflinks 29.485     High  
cufflinks 147.543     High High
cufflinks 56.445     High  
cufflinks 87.315     High  
cufflinks 29.707     High  
cufflinks 35.923     High  
cufflinks 77.448     High  

0 Strain