Gene : Medtr5g082140 M. truncatula Mt4.0v1
Defline:  (1 of 19) PTHR31384:SF19 - AUXIN RESPONSE FACTOR 17 Description:  auxin response factor
Genomic Order:  4558 Name:  ? Medtr5g082140
Secondary Identifier:  ? PAC:31087689
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g082140 0.5kb upstream 0.5kb upstream 2342 true chr5: 35272490-35274831 Medicago truncatula
Medtr5g082140 0.5kb upstream 0.5kb upstream 500 false chr5: 35272490-35272989 Medicago truncatula
Medtr5g082140 0.5kb downstream 0.5kb downstream 2342 true chr5: 35272990-35275331 Medicago truncatula
Medtr5g082140 0.5kb downstream 0.5kb downstream 500 false chr5: 35274832-35275331 Medicago truncatula
Medtr5g082140 1.0kb upstream 1.0kb upstream 2842 true chr5: 35271990-35274831 Medicago truncatula
Medtr5g082140 1.0kb upstream 1.0kb upstream 1000 false chr5: 35271990-35272989 Medicago truncatula
Medtr5g082140 1.0kb downstream 1.0kb downstream 2842 true chr5: 35272990-35275831 Medicago truncatula
Medtr5g082140 1.0kb downstream 1.0kb downstream 1000 false chr5: 35274832-35275831 Medicago truncatula
Medtr5g082140 2.0kb upstream 2.0kb upstream 3842 true chr5: 35270990-35274831 Medicago truncatula
Medtr5g082140 2.0kb upstream 2.0kb upstream 2000 false chr5: 35270990-35272989 Medicago truncatula
Medtr5g082140 2.0kb downstream 2.0kb downstream 3842 true chr5: 35272990-35276831 Medicago truncatula
Medtr5g082140 2.0kb downstream 2.0kb downstream 2000 false chr5: 35274832-35276831 Medicago truncatula
Medtr5g082140 5.0kb upstream 5.0kb upstream 6842 true chr5: 35267990-35274831 Medicago truncatula
Medtr5g082140 5.0kb upstream 5.0kb upstream 5000 false chr5: 35267990-35272989 Medicago truncatula
Medtr5g082140 5.0kb downstream 5.0kb downstream 6842 true chr5: 35272990-35279831 Medicago truncatula
Medtr5g082140 5.0kb downstream 5.0kb downstream 5000 false chr5: 35274832-35279831 Medicago truncatula
Medtr5g082140 10.0kb upstream 10.0kb upstream 11842 true chr5: 35262990-35274831 Medicago truncatula
Medtr5g082140 10.0kb upstream 10.0kb upstream 10000 false chr5: 35262990-35272989 Medicago truncatula
Medtr5g082140 10.0kb downstream 10.0kb downstream 11842 true chr5: 35272990-35284831 Medicago truncatula
Medtr5g082140 10.0kb downstream 10.0kb downstream 10000 false chr5: 35274832-35284831 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122287870 5265 Fabidae View MSA
124028292 5270 Rosid View MSA
123744136 5271 Pentapetalae View MSA
122770913 5272 Eudicot View MSA
122051947 5273 Angiosperm View MSA
121312823 5274 Embryophyte View MSA
123349961 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain