Gene : Medtr5g087390 M. truncatula Mt4.0v1
Defline:  (1 of 3) 1.2.3.1 - Aldehyde oxidase / Retinal oxidase Description:  indole-3-acetaldehyde oxidase
Genomic Order:  4916 Name:  ? Medtr5g087390
Secondary Identifier:  ? PAC:31089936
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g087390 0.5kb upstream 0.5kb upstream 8193 true chr5: 37857588-37865780 Medicago truncatula
Medtr5g087390 0.5kb upstream 0.5kb upstream 500 false chr5: 37865281-37865780 Medicago truncatula
Medtr5g087390 0.5kb downstream 0.5kb downstream 8193 true chr5: 37857088-37865280 Medicago truncatula
Medtr5g087390 0.5kb downstream 0.5kb downstream 500 false chr5: 37857088-37857587 Medicago truncatula
Medtr5g087390 1.0kb upstream 1.0kb upstream 8693 true chr5: 37857588-37866280 Medicago truncatula
Medtr5g087390 1.0kb upstream 1.0kb upstream 1000 false chr5: 37865281-37866280 Medicago truncatula
Medtr5g087390 1.0kb downstream 1.0kb downstream 8693 true chr5: 37856588-37865280 Medicago truncatula
Medtr5g087390 1.0kb downstream 1.0kb downstream 1000 false chr5: 37856588-37857587 Medicago truncatula
Medtr5g087390 2.0kb upstream 2.0kb upstream 9693 true chr5: 37857588-37867280 Medicago truncatula
Medtr5g087390 2.0kb upstream 2.0kb upstream 2000 false chr5: 37865281-37867280 Medicago truncatula
Medtr5g087390 2.0kb downstream 2.0kb downstream 9693 true chr5: 37855588-37865280 Medicago truncatula
Medtr5g087390 2.0kb downstream 2.0kb downstream 2000 false chr5: 37855588-37857587 Medicago truncatula
Medtr5g087390 5.0kb upstream 5.0kb upstream 12693 true chr5: 37857588-37870280 Medicago truncatula
Medtr5g087390 5.0kb upstream 5.0kb upstream 5000 false chr5: 37865281-37870280 Medicago truncatula
Medtr5g087390 5.0kb downstream 5.0kb downstream 12693 true chr5: 37852588-37865280 Medicago truncatula
Medtr5g087390 5.0kb downstream 5.0kb downstream 5000 false chr5: 37852588-37857587 Medicago truncatula
Medtr5g087390 10.0kb upstream 10.0kb upstream 17693 true chr5: 37857588-37875280 Medicago truncatula
Medtr5g087390 10.0kb upstream 10.0kb upstream 10000 false chr5: 37865281-37875280 Medicago truncatula
Medtr5g087390 10.0kb downstream 10.0kb downstream 17693 true chr5: 37847588-37865280 Medicago truncatula
Medtr5g087390 10.0kb downstream 10.0kb downstream 10000 false chr5: 37847588-37857587 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311295 5265 Fabidae View MSA
124064752 5270 Rosid View MSA
123746349 5271 Pentapetalae View MSA
122793870 5272 Eudicot View MSA
122051504 5273 Angiosperm View MSA
121345384 5274 Embryophyte View MSA
123426829 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.957        
cufflinks 1.449        
cufflinks 2.159        
cufflinks 0.196        
cufflinks 2.759       High
cufflinks 0.046     Low Low
cufflinks 0.354        
cufflinks 1.692        
cufflinks 0.277        

0 Strain