Gene : Medtr5g085340 M. truncatula Mt4.0v1
Defline:  (1 of 43) PF12796//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Domain of unknown function (PGG) Description:  ankyrin repeat protein
Genomic Order:  4794 Name:  ? Medtr5g085340
Secondary Identifier:  ? PAC:31090408
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g085340 0.5kb upstream 0.5kb upstream 7205 true chr5: 36876511-36883715 Medicago truncatula
Medtr5g085340 0.5kb upstream 0.5kb upstream 500 false chr5: 36876511-36877010 Medicago truncatula
Medtr5g085340 0.5kb downstream 0.5kb downstream 7205 true chr5: 36877011-36884215 Medicago truncatula
Medtr5g085340 0.5kb downstream 0.5kb downstream 500 false chr5: 36883716-36884215 Medicago truncatula
Medtr5g085340 1.0kb upstream 1.0kb upstream 7705 true chr5: 36876011-36883715 Medicago truncatula
Medtr5g085340 1.0kb upstream 1.0kb upstream 1000 false chr5: 36876011-36877010 Medicago truncatula
Medtr5g085340 1.0kb downstream 1.0kb downstream 7705 true chr5: 36877011-36884715 Medicago truncatula
Medtr5g085340 1.0kb downstream 1.0kb downstream 1000 false chr5: 36883716-36884715 Medicago truncatula
Medtr5g085340 2.0kb upstream 2.0kb upstream 8705 true chr5: 36875011-36883715 Medicago truncatula
Medtr5g085340 2.0kb upstream 2.0kb upstream 2000 false chr5: 36875011-36877010 Medicago truncatula
Medtr5g085340 2.0kb downstream 2.0kb downstream 8705 true chr5: 36877011-36885715 Medicago truncatula
Medtr5g085340 2.0kb downstream 2.0kb downstream 2000 false chr5: 36883716-36885715 Medicago truncatula
Medtr5g085340 5.0kb upstream 5.0kb upstream 11705 true chr5: 36872011-36883715 Medicago truncatula
Medtr5g085340 5.0kb upstream 5.0kb upstream 5000 false chr5: 36872011-36877010 Medicago truncatula
Medtr5g085340 5.0kb downstream 5.0kb downstream 11705 true chr5: 36877011-36888715 Medicago truncatula
Medtr5g085340 5.0kb downstream 5.0kb downstream 5000 false chr5: 36883716-36888715 Medicago truncatula
Medtr5g085340 10.0kb upstream 10.0kb upstream 16705 true chr5: 36867011-36883715 Medicago truncatula
Medtr5g085340 10.0kb upstream 10.0kb upstream 10000 false chr5: 36867011-36877010 Medicago truncatula
Medtr5g085340 10.0kb downstream 10.0kb downstream 16705 true chr5: 36877011-36893715 Medicago truncatula
Medtr5g085340 10.0kb downstream 10.0kb downstream 10000 false chr5: 36883716-36893715 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315215 5265 Fabidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.002     Low Low
cufflinks 1.124        
cufflinks 1.018        
cufflinks 0.007     Low  
cufflinks 1.119        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 1.421        
cufflinks 0.021     Low  

0 Strain