Gene : Medtr5g089000 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23346:SF19 - PROTEASOME-ASSOCIATED PROTEIN ECM29 HOMOLOG Description:  proteasome-associated ECM29-like protein
Genomic Order:  5049 Name:  ? Medtr5g089000
Secondary Identifier:  ? PAC:31089990
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g089000 0.5kb upstream 0.5kb upstream 31063 true chr5: 38646850-38677912 Medicago truncatula
Medtr5g089000 0.5kb upstream 0.5kb upstream 500 false chr5: 38646850-38647349 Medicago truncatula
Medtr5g089000 0.5kb downstream 0.5kb downstream 31063 true chr5: 38647350-38678412 Medicago truncatula
Medtr5g089000 0.5kb downstream 0.5kb downstream 500 false chr5: 38677913-38678412 Medicago truncatula
Medtr5g089000 1.0kb upstream 1.0kb upstream 31563 true chr5: 38646350-38677912 Medicago truncatula
Medtr5g089000 1.0kb upstream 1.0kb upstream 1000 false chr5: 38646350-38647349 Medicago truncatula
Medtr5g089000 1.0kb downstream 1.0kb downstream 31563 true chr5: 38647350-38678912 Medicago truncatula
Medtr5g089000 1.0kb downstream 1.0kb downstream 1000 false chr5: 38677913-38678912 Medicago truncatula
Medtr5g089000 2.0kb upstream 2.0kb upstream 32563 true chr5: 38645350-38677912 Medicago truncatula
Medtr5g089000 2.0kb upstream 2.0kb upstream 2000 false chr5: 38645350-38647349 Medicago truncatula
Medtr5g089000 2.0kb downstream 2.0kb downstream 32563 true chr5: 38647350-38679912 Medicago truncatula
Medtr5g089000 2.0kb downstream 2.0kb downstream 2000 false chr5: 38677913-38679912 Medicago truncatula
Medtr5g089000 5.0kb upstream 5.0kb upstream 35563 true chr5: 38642350-38677912 Medicago truncatula
Medtr5g089000 5.0kb upstream 5.0kb upstream 5000 false chr5: 38642350-38647349 Medicago truncatula
Medtr5g089000 5.0kb downstream 5.0kb downstream 35563 true chr5: 38647350-38682912 Medicago truncatula
Medtr5g089000 5.0kb downstream 5.0kb downstream 5000 false chr5: 38677913-38682912 Medicago truncatula
Medtr5g089000 10.0kb upstream 10.0kb upstream 40563 true chr5: 38637350-38677912 Medicago truncatula
Medtr5g089000 10.0kb upstream 10.0kb upstream 10000 false chr5: 38637350-38647349 Medicago truncatula
Medtr5g089000 10.0kb downstream 10.0kb downstream 40563 true chr5: 38647350-38687912 Medicago truncatula
Medtr5g089000 10.0kb downstream 10.0kb downstream 10000 false chr5: 38677913-38687912 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299645 5265 Fabidae View MSA
124060426 5270 Rosid View MSA
123740160 5271 Pentapetalae View MSA
122788135 5272 Eudicot View MSA
122042594 5273 Angiosperm View MSA
121344548 5274 Embryophyte View MSA
123425052 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.631        
cufflinks 1.784        
cufflinks 1.468        
cufflinks 0.35       Low
cufflinks 2.007       High
cufflinks 0.296       Low
cufflinks 0.84        
cufflinks 1.461        
cufflinks 0.812        

0 Strain