Gene : Medtr5g085830 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR24177:SF52 - ANKYRIN REPEAT FAMILY PROTEIN-RELATED Description:  ankyrin repeat protein
Genomic Order:  4826 Name:  ? Medtr5g085830
Secondary Identifier:  ? PAC:31084965
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g085830 0.5kb upstream 0.5kb upstream 3275 true chr5: 37079263-37082537 Medicago truncatula
Medtr5g085830 0.5kb upstream 0.5kb upstream 500 false chr5: 37082038-37082537 Medicago truncatula
Medtr5g085830 0.5kb downstream 0.5kb downstream 3275 true chr5: 37078763-37082037 Medicago truncatula
Medtr5g085830 0.5kb downstream 0.5kb downstream 500 false chr5: 37078763-37079262 Medicago truncatula
Medtr5g085830 1.0kb upstream 1.0kb upstream 3775 true chr5: 37079263-37083037 Medicago truncatula
Medtr5g085830 1.0kb upstream 1.0kb upstream 1000 false chr5: 37082038-37083037 Medicago truncatula
Medtr5g085830 1.0kb downstream 1.0kb downstream 3775 true chr5: 37078263-37082037 Medicago truncatula
Medtr5g085830 1.0kb downstream 1.0kb downstream 1000 false chr5: 37078263-37079262 Medicago truncatula
Medtr5g085830 2.0kb upstream 2.0kb upstream 4775 true chr5: 37079263-37084037 Medicago truncatula
Medtr5g085830 2.0kb upstream 2.0kb upstream 2000 false chr5: 37082038-37084037 Medicago truncatula
Medtr5g085830 2.0kb downstream 2.0kb downstream 4775 true chr5: 37077263-37082037 Medicago truncatula
Medtr5g085830 2.0kb downstream 2.0kb downstream 2000 false chr5: 37077263-37079262 Medicago truncatula
Medtr5g085830 5.0kb upstream 5.0kb upstream 7775 true chr5: 37079263-37087037 Medicago truncatula
Medtr5g085830 5.0kb upstream 5.0kb upstream 5000 false chr5: 37082038-37087037 Medicago truncatula
Medtr5g085830 5.0kb downstream 5.0kb downstream 7775 true chr5: 37074263-37082037 Medicago truncatula
Medtr5g085830 5.0kb downstream 5.0kb downstream 5000 false chr5: 37074263-37079262 Medicago truncatula
Medtr5g085830 10.0kb upstream 10.0kb upstream 12775 true chr5: 37079263-37092037 Medicago truncatula
Medtr5g085830 10.0kb upstream 10.0kb upstream 10000 false chr5: 37082038-37092037 Medicago truncatula
Medtr5g085830 10.0kb downstream 10.0kb downstream 12775 true chr5: 37069263-37082037 Medicago truncatula
Medtr5g085830 10.0kb downstream 10.0kb downstream 10000 false chr5: 37069263-37079262 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315057 5265 Fabidae View MSA
124074725 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low Low
cufflinks 0.095        
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.096        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.126        
cufflinks 0.024     Low  

0 Strain