Gene : Medtr5g074880 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13073 - GCN5-RELATED Description:  GCN5-like protein 1 (GCN5L1) protein
Genomic Order:  4087 Name:  ? Medtr5g074880
Secondary Identifier:  ? PAC:31089982
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g074880 0.5kb upstream 0.5kb upstream 4130 true chr5: 31809376-31813505 Medicago truncatula
Medtr5g074880 0.5kb upstream 0.5kb upstream 500 false chr5: 31813006-31813505 Medicago truncatula
Medtr5g074880 0.5kb downstream 0.5kb downstream 4130 true chr5: 31808876-31813005 Medicago truncatula
Medtr5g074880 0.5kb downstream 0.5kb downstream 500 false chr5: 31808876-31809375 Medicago truncatula
Medtr5g074880 1.0kb upstream 1.0kb upstream 4630 true chr5: 31809376-31814005 Medicago truncatula
Medtr5g074880 1.0kb upstream 1.0kb upstream 1000 false chr5: 31813006-31814005 Medicago truncatula
Medtr5g074880 1.0kb downstream 1.0kb downstream 4630 true chr5: 31808376-31813005 Medicago truncatula
Medtr5g074880 1.0kb downstream 1.0kb downstream 1000 false chr5: 31808376-31809375 Medicago truncatula
Medtr5g074880 2.0kb upstream 2.0kb upstream 5630 true chr5: 31809376-31815005 Medicago truncatula
Medtr5g074880 2.0kb upstream 2.0kb upstream 2000 false chr5: 31813006-31815005 Medicago truncatula
Medtr5g074880 2.0kb downstream 2.0kb downstream 5630 true chr5: 31807376-31813005 Medicago truncatula
Medtr5g074880 2.0kb downstream 2.0kb downstream 2000 false chr5: 31807376-31809375 Medicago truncatula
Medtr5g074880 5.0kb upstream 5.0kb upstream 8630 true chr5: 31809376-31818005 Medicago truncatula
Medtr5g074880 5.0kb upstream 5.0kb upstream 5000 false chr5: 31813006-31818005 Medicago truncatula
Medtr5g074880 5.0kb downstream 5.0kb downstream 8630 true chr5: 31804376-31813005 Medicago truncatula
Medtr5g074880 5.0kb downstream 5.0kb downstream 5000 false chr5: 31804376-31809375 Medicago truncatula
Medtr5g074880 10.0kb upstream 10.0kb upstream 13630 true chr5: 31809376-31823005 Medicago truncatula
Medtr5g074880 10.0kb upstream 10.0kb upstream 10000 false chr5: 31813006-31823005 Medicago truncatula
Medtr5g074880 10.0kb downstream 10.0kb downstream 13630 true chr5: 31799376-31813005 Medicago truncatula
Medtr5g074880 10.0kb downstream 10.0kb downstream 10000 false chr5: 31799376-31809375 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308765 5265 Fabidae View MSA
124067786 5270 Rosid View MSA
123736631 5271 Pentapetalae View MSA
122790924 5272 Eudicot View MSA
122042285 5273 Angiosperm View MSA
121346098 5274 Embryophyte View MSA
123425317 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.786       Low
cufflinks 2.353        
cufflinks 1.738        
cufflinks 0.483       Low
cufflinks 3.222       High
cufflinks 1.448        
cufflinks 2.108        
cufflinks 1.481        
cufflinks 1.424        

0 Strain