Gene : Medtr5g079860 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR30544:SF6 - RADICAL SAM DOMAIN-CONTAINING PROTEIN Description:  23S rRNA m2A2503 methyltransferase
Genomic Order:  4403 Name:  ? Medtr5g079860
Secondary Identifier:  ? PAC:31087682
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g079860 0.5kb upstream 0.5kb upstream 5601 true chr5: 34152685-34158285 Medicago truncatula
Medtr5g079860 0.5kb upstream 0.5kb upstream 500 false chr5: 34152685-34153184 Medicago truncatula
Medtr5g079860 0.5kb downstream 0.5kb downstream 5601 true chr5: 34153185-34158785 Medicago truncatula
Medtr5g079860 0.5kb downstream 0.5kb downstream 500 false chr5: 34158286-34158785 Medicago truncatula
Medtr5g079860 1.0kb upstream 1.0kb upstream 6101 true chr5: 34152185-34158285 Medicago truncatula
Medtr5g079860 1.0kb upstream 1.0kb upstream 1000 false chr5: 34152185-34153184 Medicago truncatula
Medtr5g079860 1.0kb downstream 1.0kb downstream 6101 true chr5: 34153185-34159285 Medicago truncatula
Medtr5g079860 1.0kb downstream 1.0kb downstream 1000 false chr5: 34158286-34159285 Medicago truncatula
Medtr5g079860 2.0kb upstream 2.0kb upstream 7101 true chr5: 34151185-34158285 Medicago truncatula
Medtr5g079860 2.0kb upstream 2.0kb upstream 2000 false chr5: 34151185-34153184 Medicago truncatula
Medtr5g079860 2.0kb downstream 2.0kb downstream 7101 true chr5: 34153185-34160285 Medicago truncatula
Medtr5g079860 2.0kb downstream 2.0kb downstream 2000 false chr5: 34158286-34160285 Medicago truncatula
Medtr5g079860 5.0kb upstream 5.0kb upstream 10101 true chr5: 34148185-34158285 Medicago truncatula
Medtr5g079860 5.0kb upstream 5.0kb upstream 5000 false chr5: 34148185-34153184 Medicago truncatula
Medtr5g079860 5.0kb downstream 5.0kb downstream 10101 true chr5: 34153185-34163285 Medicago truncatula
Medtr5g079860 5.0kb downstream 5.0kb downstream 5000 false chr5: 34158286-34163285 Medicago truncatula
Medtr5g079860 10.0kb upstream 10.0kb upstream 15101 true chr5: 34143185-34158285 Medicago truncatula
Medtr5g079860 10.0kb upstream 10.0kb upstream 10000 false chr5: 34143185-34153184 Medicago truncatula
Medtr5g079860 10.0kb downstream 10.0kb downstream 15101 true chr5: 34153185-34168285 Medicago truncatula
Medtr5g079860 10.0kb downstream 10.0kb downstream 10000 false chr5: 34158286-34168285 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305282 5265 Fabidae View MSA
124061509 5270 Rosid View MSA
123743961 5271 Pentapetalae View MSA
122788034 5272 Eudicot View MSA
122048523 5273 Angiosperm View MSA
123429187 5275 Viridiplantae View MSA
121344688 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.201        
cufflinks 4.484        
cufflinks 8.073        
cufflinks 0.745        
cufflinks 13.125     High High
cufflinks 0.211       Low
cufflinks 1.213        
cufflinks 8.064        
cufflinks 0.889        

0 Strain