Gene : Medtr5g069780 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23076:SF70 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 7, CHLOROPLASTIC-RELATED Description:  ATP-dependent zinc metalloprotease FTSH protein
Genomic Order:  3773 Name:  ? Medtr5g069780
Secondary Identifier:  ? PAC:31088724
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g069780 0.5kb upstream 0.5kb upstream 8050 true chr5: 29599470-29607519 Medicago truncatula
Medtr5g069780 0.5kb upstream 0.5kb upstream 500 false chr5: 29599470-29599969 Medicago truncatula
Medtr5g069780 0.5kb downstream 0.5kb downstream 8050 true chr5: 29599970-29608019 Medicago truncatula
Medtr5g069780 0.5kb downstream 0.5kb downstream 500 false chr5: 29607520-29608019 Medicago truncatula
Medtr5g069780 1.0kb upstream 1.0kb upstream 8550 true chr5: 29598970-29607519 Medicago truncatula
Medtr5g069780 1.0kb upstream 1.0kb upstream 1000 false chr5: 29598970-29599969 Medicago truncatula
Medtr5g069780 1.0kb downstream 1.0kb downstream 8550 true chr5: 29599970-29608519 Medicago truncatula
Medtr5g069780 1.0kb downstream 1.0kb downstream 1000 false chr5: 29607520-29608519 Medicago truncatula
Medtr5g069780 2.0kb upstream 2.0kb upstream 9550 true chr5: 29597970-29607519 Medicago truncatula
Medtr5g069780 2.0kb upstream 2.0kb upstream 2000 false chr5: 29597970-29599969 Medicago truncatula
Medtr5g069780 2.0kb downstream 2.0kb downstream 9550 true chr5: 29599970-29609519 Medicago truncatula
Medtr5g069780 2.0kb downstream 2.0kb downstream 2000 false chr5: 29607520-29609519 Medicago truncatula
Medtr5g069780 5.0kb upstream 5.0kb upstream 12550 true chr5: 29594970-29607519 Medicago truncatula
Medtr5g069780 5.0kb upstream 5.0kb upstream 5000 false chr5: 29594970-29599969 Medicago truncatula
Medtr5g069780 5.0kb downstream 5.0kb downstream 12550 true chr5: 29599970-29612519 Medicago truncatula
Medtr5g069780 5.0kb downstream 5.0kb downstream 5000 false chr5: 29607520-29612519 Medicago truncatula
Medtr5g069780 10.0kb upstream 10.0kb upstream 17550 true chr5: 29589970-29607519 Medicago truncatula
Medtr5g069780 10.0kb upstream 10.0kb upstream 10000 false chr5: 29589970-29599969 Medicago truncatula
Medtr5g069780 10.0kb downstream 10.0kb downstream 17550 true chr5: 29599970-29617519 Medicago truncatula
Medtr5g069780 10.0kb downstream 10.0kb downstream 10000 false chr5: 29607520-29617519 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122787549 5272 Eudicot View MSA
122304419 5265 Fabidae View MSA
124063114 5270 Rosid View MSA
123748057 5271 Pentapetalae View MSA
122042272 5273 Angiosperm View MSA
121349711 5274 Embryophyte View MSA
123424503 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.712        
cufflinks 10.224     High  
cufflinks 17.987     High High
cufflinks 2.176        
cufflinks 12.963     High  
cufflinks 1.205       Low
cufflinks 3.1        
cufflinks 15.611     High High
cufflinks 2.258        

0 Strain