Gene : Medtr5g072570 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11802//PTHR11802:SF20 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE Description:  serine carboxypeptidase-like protein
Genomic Order:  3954 Name:  ? Medtr5g072570
Secondary Identifier:  ? PAC:31091319
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g072570 0.5kb upstream 0.5kb upstream 4461 true chr5: 30903173-30907633 Medicago truncatula
Medtr5g072570 0.5kb upstream 0.5kb upstream 500 false chr5: 30907134-30907633 Medicago truncatula
Medtr5g072570 0.5kb downstream 0.5kb downstream 4461 true chr5: 30902673-30907133 Medicago truncatula
Medtr5g072570 0.5kb downstream 0.5kb downstream 500 false chr5: 30902673-30903172 Medicago truncatula
Medtr5g072570 1.0kb upstream 1.0kb upstream 4961 true chr5: 30903173-30908133 Medicago truncatula
Medtr5g072570 1.0kb upstream 1.0kb upstream 1000 false chr5: 30907134-30908133 Medicago truncatula
Medtr5g072570 1.0kb downstream 1.0kb downstream 4961 true chr5: 30902173-30907133 Medicago truncatula
Medtr5g072570 1.0kb downstream 1.0kb downstream 1000 false chr5: 30902173-30903172 Medicago truncatula
Medtr5g072570 2.0kb upstream 2.0kb upstream 5961 true chr5: 30903173-30909133 Medicago truncatula
Medtr5g072570 2.0kb upstream 2.0kb upstream 2000 false chr5: 30907134-30909133 Medicago truncatula
Medtr5g072570 2.0kb downstream 2.0kb downstream 5961 true chr5: 30901173-30907133 Medicago truncatula
Medtr5g072570 2.0kb downstream 2.0kb downstream 2000 false chr5: 30901173-30903172 Medicago truncatula
Medtr5g072570 5.0kb upstream 5.0kb upstream 8961 true chr5: 30903173-30912133 Medicago truncatula
Medtr5g072570 5.0kb upstream 5.0kb upstream 5000 false chr5: 30907134-30912133 Medicago truncatula
Medtr5g072570 5.0kb downstream 5.0kb downstream 8961 true chr5: 30898173-30907133 Medicago truncatula
Medtr5g072570 5.0kb downstream 5.0kb downstream 5000 false chr5: 30898173-30903172 Medicago truncatula
Medtr5g072570 10.0kb upstream 10.0kb upstream 13961 true chr5: 30903173-30917133 Medicago truncatula
Medtr5g072570 10.0kb upstream 10.0kb upstream 10000 false chr5: 30907134-30917133 Medicago truncatula
Medtr5g072570 10.0kb downstream 10.0kb downstream 13961 true chr5: 30893173-30907133 Medicago truncatula
Medtr5g072570 10.0kb downstream 10.0kb downstream 10000 false chr5: 30893173-30903172 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310905 5265 Fabidae View MSA
124061413 5270 Rosid View MSA
123737952 5271 Pentapetalae View MSA
122791491 5272 Eudicot View MSA
122043115 5273 Angiosperm View MSA
121351274 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.66       High
cufflinks 0.488        
cufflinks 0.341        
cufflinks 0.556        
cufflinks 0.657        
cufflinks 0.173       Low
cufflinks 1.036        
cufflinks 0.389        
cufflinks 1.356        

0 Strain