Gene : Medtr6g017010 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF02135//PF08214 - TAZ zinc finger (zf-TAZ) // Histone acetylation protein (HAT_KAT11) Description:  histone acetyltransferase of the CBP family protein
Genomic Order:  878 Name:  ? Medtr6g017010
Secondary Identifier:  ? PAC:31104666
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g017010 0.5kb upstream 0.5kb upstream 4124 true chr6: 6677599-6681722 Medicago truncatula
Medtr6g017010 0.5kb upstream 0.5kb upstream 500 false chr6: 6677599-6678098 Medicago truncatula
Medtr6g017010 0.5kb downstream 0.5kb downstream 4124 true chr6: 6678099-6682222 Medicago truncatula
Medtr6g017010 0.5kb downstream 0.5kb downstream 500 false chr6: 6681723-6682222 Medicago truncatula
Medtr6g017010 1.0kb upstream 1.0kb upstream 4624 true chr6: 6677099-6681722 Medicago truncatula
Medtr6g017010 1.0kb upstream 1.0kb upstream 1000 false chr6: 6677099-6678098 Medicago truncatula
Medtr6g017010 1.0kb downstream 1.0kb downstream 4624 true chr6: 6678099-6682722 Medicago truncatula
Medtr6g017010 1.0kb downstream 1.0kb downstream 1000 false chr6: 6681723-6682722 Medicago truncatula
Medtr6g017010 2.0kb upstream 2.0kb upstream 5624 true chr6: 6676099-6681722 Medicago truncatula
Medtr6g017010 2.0kb upstream 2.0kb upstream 2000 false chr6: 6676099-6678098 Medicago truncatula
Medtr6g017010 2.0kb downstream 2.0kb downstream 5624 true chr6: 6678099-6683722 Medicago truncatula
Medtr6g017010 2.0kb downstream 2.0kb downstream 2000 false chr6: 6681723-6683722 Medicago truncatula
Medtr6g017010 5.0kb upstream 5.0kb upstream 8624 true chr6: 6673099-6681722 Medicago truncatula
Medtr6g017010 5.0kb upstream 5.0kb upstream 5000 false chr6: 6673099-6678098 Medicago truncatula
Medtr6g017010 5.0kb downstream 5.0kb downstream 8624 true chr6: 6678099-6686722 Medicago truncatula
Medtr6g017010 5.0kb downstream 5.0kb downstream 5000 false chr6: 6681723-6686722 Medicago truncatula
Medtr6g017010 10.0kb upstream 10.0kb upstream 13624 true chr6: 6668099-6681722 Medicago truncatula
Medtr6g017010 10.0kb upstream 10.0kb upstream 10000 false chr6: 6668099-6678098 Medicago truncatula
Medtr6g017010 10.0kb downstream 10.0kb downstream 13624 true chr6: 6678099-6691722 Medicago truncatula
Medtr6g017010 10.0kb downstream 10.0kb downstream 10000 false chr6: 6681723-6691722 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122266030 5265 Fabidae Singleton cluster - no MSA
124071330 5270 Rosid View MSA
123747682 5271 Pentapetalae View MSA
122772267 5272 Eudicot View MSA
122049603 5273 Angiosperm View MSA
121311498 5274 Embryophyte View MSA
123426645 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low  
cufflinks 0.004     Low  
cufflinks 0.008     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain