Gene : Medtr6g022260 M. truncatula Mt4.0v1
Defline:  (1 of 599) PF13041 - PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  1014 Name:  ? Medtr6g022260
Secondary Identifier:  ? PAC:31103347
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g022260 0.5kb upstream 0.5kb upstream 2216 true chr6: 7757320-7759535 Medicago truncatula
Medtr6g022260 0.5kb upstream 0.5kb upstream 500 false chr6: 7759036-7759535 Medicago truncatula
Medtr6g022260 0.5kb downstream 0.5kb downstream 2216 true chr6: 7756820-7759035 Medicago truncatula
Medtr6g022260 0.5kb downstream 0.5kb downstream 500 false chr6: 7756820-7757319 Medicago truncatula
Medtr6g022260 1.0kb upstream 1.0kb upstream 2716 true chr6: 7757320-7760035 Medicago truncatula
Medtr6g022260 1.0kb upstream 1.0kb upstream 1000 false chr6: 7759036-7760035 Medicago truncatula
Medtr6g022260 1.0kb downstream 1.0kb downstream 2716 true chr6: 7756320-7759035 Medicago truncatula
Medtr6g022260 1.0kb downstream 1.0kb downstream 1000 false chr6: 7756320-7757319 Medicago truncatula
Medtr6g022260 2.0kb upstream 2.0kb upstream 3716 true chr6: 7757320-7761035 Medicago truncatula
Medtr6g022260 2.0kb upstream 2.0kb upstream 2000 false chr6: 7759036-7761035 Medicago truncatula
Medtr6g022260 2.0kb downstream 2.0kb downstream 3716 true chr6: 7755320-7759035 Medicago truncatula
Medtr6g022260 2.0kb downstream 2.0kb downstream 2000 false chr6: 7755320-7757319 Medicago truncatula
Medtr6g022260 5.0kb upstream 5.0kb upstream 6716 true chr6: 7757320-7764035 Medicago truncatula
Medtr6g022260 5.0kb upstream 5.0kb upstream 5000 false chr6: 7759036-7764035 Medicago truncatula
Medtr6g022260 5.0kb downstream 5.0kb downstream 6716 true chr6: 7752320-7759035 Medicago truncatula
Medtr6g022260 5.0kb downstream 5.0kb downstream 5000 false chr6: 7752320-7757319 Medicago truncatula
Medtr6g022260 10.0kb upstream 10.0kb upstream 11716 true chr6: 7757320-7769035 Medicago truncatula
Medtr6g022260 10.0kb upstream 10.0kb upstream 10000 false chr6: 7759036-7769035 Medicago truncatula
Medtr6g022260 10.0kb downstream 10.0kb downstream 11716 true chr6: 7747320-7759035 Medicago truncatula
Medtr6g022260 10.0kb downstream 10.0kb downstream 10000 false chr6: 7747320-7757319 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306783 5265 Fabidae View MSA
124063635 5270 Rosid View MSA
123750862 5271 Pentapetalae View MSA
122792992 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.572        
cufflinks 0.366        
cufflinks 0.422        
cufflinks 0.133       Low
cufflinks 0.786       High
cufflinks 0.771       High
cufflinks 0.416        
cufflinks 0.359        
cufflinks 0.391        

0 Strain