Gene : Medtr6g023590 M. truncatula Mt4.0v1
Defline:  (1 of 26) PF08659 - KR domain (KR) Description:  short-chain alcohol dehydrogenase
Genomic Order:  1082 Name:  ? Medtr6g023590
Secondary Identifier:  ? PAC:31105546
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g023590 0.5kb upstream 0.5kb upstream 1615 true chr6: 8256601-8258215 Medicago truncatula
Medtr6g023590 0.5kb upstream 0.5kb upstream 500 false chr6: 8257716-8258215 Medicago truncatula
Medtr6g023590 0.5kb downstream 0.5kb downstream 1615 true chr6: 8256101-8257715 Medicago truncatula
Medtr6g023590 0.5kb downstream 0.5kb downstream 500 false chr6: 8256101-8256600 Medicago truncatula
Medtr6g023590 1.0kb upstream 1.0kb upstream 2115 true chr6: 8256601-8258715 Medicago truncatula
Medtr6g023590 1.0kb upstream 1.0kb upstream 1000 false chr6: 8257716-8258715 Medicago truncatula
Medtr6g023590 1.0kb downstream 1.0kb downstream 2115 true chr6: 8255601-8257715 Medicago truncatula
Medtr6g023590 1.0kb downstream 1.0kb downstream 1000 false chr6: 8255601-8256600 Medicago truncatula
Medtr6g023590 2.0kb upstream 2.0kb upstream 3115 true chr6: 8256601-8259715 Medicago truncatula
Medtr6g023590 2.0kb upstream 2.0kb upstream 2000 false chr6: 8257716-8259715 Medicago truncatula
Medtr6g023590 2.0kb downstream 2.0kb downstream 3115 true chr6: 8254601-8257715 Medicago truncatula
Medtr6g023590 2.0kb downstream 2.0kb downstream 2000 false chr6: 8254601-8256600 Medicago truncatula
Medtr6g023590 5.0kb upstream 5.0kb upstream 6115 true chr6: 8256601-8262715 Medicago truncatula
Medtr6g023590 5.0kb upstream 5.0kb upstream 5000 false chr6: 8257716-8262715 Medicago truncatula
Medtr6g023590 5.0kb downstream 5.0kb downstream 6115 true chr6: 8251601-8257715 Medicago truncatula
Medtr6g023590 5.0kb downstream 5.0kb downstream 5000 false chr6: 8251601-8256600 Medicago truncatula
Medtr6g023590 10.0kb upstream 10.0kb upstream 11115 true chr6: 8256601-8267715 Medicago truncatula
Medtr6g023590 10.0kb upstream 10.0kb upstream 10000 false chr6: 8257716-8267715 Medicago truncatula
Medtr6g023590 10.0kb downstream 10.0kb downstream 11115 true chr6: 8246601-8257715 Medicago truncatula
Medtr6g023590 10.0kb downstream 10.0kb downstream 10000 false chr6: 8246601-8256600 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312309 5265 Fabidae View MSA
124066555 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.072        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.787       High

0 Strain