Gene : Medtr6g022780 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR22950//PTHR22950:SF298 - AMINO ACID TRANSPORTER Description:  transmembrane amino acid transporter family protein
Genomic Order:  1051 Name:  ? Medtr6g022780
Secondary Identifier:  ? PAC:31102328
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g022780 0.5kb upstream 0.5kb upstream 3492 true chr6: 7970103-7973594 Medicago truncatula
Medtr6g022780 0.5kb upstream 0.5kb upstream 500 false chr6: 7973095-7973594 Medicago truncatula
Medtr6g022780 0.5kb downstream 0.5kb downstream 3492 true chr6: 7969603-7973094 Medicago truncatula
Medtr6g022780 0.5kb downstream 0.5kb downstream 500 false chr6: 7969603-7970102 Medicago truncatula
Medtr6g022780 1.0kb upstream 1.0kb upstream 3992 true chr6: 7970103-7974094 Medicago truncatula
Medtr6g022780 1.0kb upstream 1.0kb upstream 1000 false chr6: 7973095-7974094 Medicago truncatula
Medtr6g022780 1.0kb downstream 1.0kb downstream 3992 true chr6: 7969103-7973094 Medicago truncatula
Medtr6g022780 1.0kb downstream 1.0kb downstream 1000 false chr6: 7969103-7970102 Medicago truncatula
Medtr6g022780 2.0kb upstream 2.0kb upstream 4992 true chr6: 7970103-7975094 Medicago truncatula
Medtr6g022780 2.0kb upstream 2.0kb upstream 2000 false chr6: 7973095-7975094 Medicago truncatula
Medtr6g022780 2.0kb downstream 2.0kb downstream 4992 true chr6: 7968103-7973094 Medicago truncatula
Medtr6g022780 2.0kb downstream 2.0kb downstream 2000 false chr6: 7968103-7970102 Medicago truncatula
Medtr6g022780 5.0kb upstream 5.0kb upstream 7992 true chr6: 7970103-7978094 Medicago truncatula
Medtr6g022780 5.0kb upstream 5.0kb upstream 5000 false chr6: 7973095-7978094 Medicago truncatula
Medtr6g022780 5.0kb downstream 5.0kb downstream 7992 true chr6: 7965103-7973094 Medicago truncatula
Medtr6g022780 5.0kb downstream 5.0kb downstream 5000 false chr6: 7965103-7970102 Medicago truncatula
Medtr6g022780 10.0kb upstream 10.0kb upstream 12992 true chr6: 7970103-7983094 Medicago truncatula
Medtr6g022780 10.0kb upstream 10.0kb upstream 10000 false chr6: 7973095-7983094 Medicago truncatula
Medtr6g022780 10.0kb downstream 10.0kb downstream 12992 true chr6: 7960103-7973094 Medicago truncatula
Medtr6g022780 10.0kb downstream 10.0kb downstream 10000 false chr6: 7960103-7970102 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029224 5273 Angiosperm View MSA
122271802 5265 Fabidae View MSA
124051962 5270 Rosid View MSA
123755793 5271 Pentapetalae View MSA
122777013 5272 Eudicot View MSA
121298587 5274 Embryophyte View MSA
123428146 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low Low
cufflinks 0.019     Low  
cufflinks 0.028     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain