Gene : Medtr6g025470 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR11410 - ATP SYNTHASE SUBUNIT A Description:  ATP synthase subunit A
Genomic Order:  1178 Name:  ? Medtr6g025470
Secondary Identifier:  ? PAC:31103084
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6126 Medicago truncatula pathologic  
Mtruncatula PWY-7219 Medicago truncatula pathologic  
Mtruncatula PWY-7229 Medicago truncatula pathologic  
Mtruncatula PWY-841 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g025470 0.5kb upstream 0.5kb upstream 2130 true chr6: 8867826-8869955 Medicago truncatula
Medtr6g025470 0.5kb upstream 0.5kb upstream 500 false chr6: 8869456-8869955 Medicago truncatula
Medtr6g025470 0.5kb downstream 0.5kb downstream 2130 true chr6: 8867326-8869455 Medicago truncatula
Medtr6g025470 0.5kb downstream 0.5kb downstream 500 false chr6: 8867326-8867825 Medicago truncatula
Medtr6g025470 1.0kb upstream 1.0kb upstream 2630 true chr6: 8867826-8870455 Medicago truncatula
Medtr6g025470 1.0kb upstream 1.0kb upstream 1000 false chr6: 8869456-8870455 Medicago truncatula
Medtr6g025470 1.0kb downstream 1.0kb downstream 2630 true chr6: 8866826-8869455 Medicago truncatula
Medtr6g025470 1.0kb downstream 1.0kb downstream 1000 false chr6: 8866826-8867825 Medicago truncatula
Medtr6g025470 2.0kb upstream 2.0kb upstream 3630 true chr6: 8867826-8871455 Medicago truncatula
Medtr6g025470 2.0kb upstream 2.0kb upstream 2000 false chr6: 8869456-8871455 Medicago truncatula
Medtr6g025470 2.0kb downstream 2.0kb downstream 3630 true chr6: 8865826-8869455 Medicago truncatula
Medtr6g025470 2.0kb downstream 2.0kb downstream 2000 false chr6: 8865826-8867825 Medicago truncatula
Medtr6g025470 5.0kb upstream 5.0kb upstream 6630 true chr6: 8867826-8874455 Medicago truncatula
Medtr6g025470 5.0kb upstream 5.0kb upstream 5000 false chr6: 8869456-8874455 Medicago truncatula
Medtr6g025470 5.0kb downstream 5.0kb downstream 6630 true chr6: 8862826-8869455 Medicago truncatula
Medtr6g025470 5.0kb downstream 5.0kb downstream 5000 false chr6: 8862826-8867825 Medicago truncatula
Medtr6g025470 10.0kb upstream 10.0kb upstream 11630 true chr6: 8867826-8879455 Medicago truncatula
Medtr6g025470 10.0kb upstream 10.0kb upstream 10000 false chr6: 8869456-8879455 Medicago truncatula
Medtr6g025470 10.0kb downstream 10.0kb downstream 11630 true chr6: 8857826-8869455 Medicago truncatula
Medtr6g025470 10.0kb downstream 10.0kb downstream 10000 false chr6: 8857826-8867825 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029129 5273 Angiosperm View MSA
122297941 5265 Fabidae View MSA
124040379 5270 Rosid View MSA
123743071 5271 Pentapetalae View MSA
122770511 5272 Eudicot View MSA
121348660 5274 Embryophyte View MSA
123428637 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain