Gene : Medtr6g027590 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11669:SF1 - REPLICATION FACTOR C SUBUNIT 3 Description:  DNA replication factor C complex subunit 3
Genomic Order:  1259 Name:  ? Medtr6g027590
Secondary Identifier:  ? PAC:31103825
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g027590 0.5kb upstream 0.5kb upstream 6311 true chr6: 9558120-9564430 Medicago truncatula
Medtr6g027590 0.5kb upstream 0.5kb upstream 500 false chr6: 9558120-9558619 Medicago truncatula
Medtr6g027590 0.5kb downstream 0.5kb downstream 6311 true chr6: 9558620-9564930 Medicago truncatula
Medtr6g027590 0.5kb downstream 0.5kb downstream 500 false chr6: 9564431-9564930 Medicago truncatula
Medtr6g027590 1.0kb upstream 1.0kb upstream 6811 true chr6: 9557620-9564430 Medicago truncatula
Medtr6g027590 1.0kb upstream 1.0kb upstream 1000 false chr6: 9557620-9558619 Medicago truncatula
Medtr6g027590 1.0kb downstream 1.0kb downstream 6811 true chr6: 9558620-9565430 Medicago truncatula
Medtr6g027590 1.0kb downstream 1.0kb downstream 1000 false chr6: 9564431-9565430 Medicago truncatula
Medtr6g027590 2.0kb upstream 2.0kb upstream 7811 true chr6: 9556620-9564430 Medicago truncatula
Medtr6g027590 2.0kb upstream 2.0kb upstream 2000 false chr6: 9556620-9558619 Medicago truncatula
Medtr6g027590 2.0kb downstream 2.0kb downstream 7811 true chr6: 9558620-9566430 Medicago truncatula
Medtr6g027590 2.0kb downstream 2.0kb downstream 2000 false chr6: 9564431-9566430 Medicago truncatula
Medtr6g027590 5.0kb upstream 5.0kb upstream 10811 true chr6: 9553620-9564430 Medicago truncatula
Medtr6g027590 5.0kb upstream 5.0kb upstream 5000 false chr6: 9553620-9558619 Medicago truncatula
Medtr6g027590 5.0kb downstream 5.0kb downstream 10811 true chr6: 9558620-9569430 Medicago truncatula
Medtr6g027590 5.0kb downstream 5.0kb downstream 5000 false chr6: 9564431-9569430 Medicago truncatula
Medtr6g027590 10.0kb upstream 10.0kb upstream 15811 true chr6: 9548620-9564430 Medicago truncatula
Medtr6g027590 10.0kb upstream 10.0kb upstream 10000 false chr6: 9548620-9558619 Medicago truncatula
Medtr6g027590 10.0kb downstream 10.0kb downstream 15811 true chr6: 9558620-9574430 Medicago truncatula
Medtr6g027590 10.0kb downstream 10.0kb downstream 10000 false chr6: 9564431-9574430 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313460 5265 Fabidae View MSA
124061589 5270 Rosid View MSA
123739027 5271 Pentapetalae View MSA
122788068 5272 Eudicot View MSA
122043390 5273 Angiosperm View MSA
121345700 5274 Embryophyte View MSA
123424767 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.377        
cufflinks 0.228        
cufflinks 0.244        
cufflinks 0.188        
cufflinks 0.45        
cufflinks 0.158       Low
cufflinks 0.515        
cufflinks 0.247        
cufflinks 0.84       High

0 Strain