Gene : Medtr6g026810 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23089:SF12 - HIS TRIAD FAMILY PROTEIN 3 Description:  scavenger mRNA decapping enzyme carboxy-term-binding protein
Genomic Order:  1202 Name:  ? Medtr6g026810
Secondary Identifier:  ? PAC:31104417
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g026810 0.5kb upstream 0.5kb upstream 3844 true chr6: 9052113-9055956 Medicago truncatula
Medtr6g026810 0.5kb upstream 0.5kb upstream 500 false chr6: 9052113-9052612 Medicago truncatula
Medtr6g026810 0.5kb downstream 0.5kb downstream 3844 true chr6: 9052613-9056456 Medicago truncatula
Medtr6g026810 0.5kb downstream 0.5kb downstream 500 false chr6: 9055957-9056456 Medicago truncatula
Medtr6g026810 1.0kb upstream 1.0kb upstream 4344 true chr6: 9051613-9055956 Medicago truncatula
Medtr6g026810 1.0kb upstream 1.0kb upstream 1000 false chr6: 9051613-9052612 Medicago truncatula
Medtr6g026810 1.0kb downstream 1.0kb downstream 4344 true chr6: 9052613-9056956 Medicago truncatula
Medtr6g026810 1.0kb downstream 1.0kb downstream 1000 false chr6: 9055957-9056956 Medicago truncatula
Medtr6g026810 2.0kb upstream 2.0kb upstream 5344 true chr6: 9050613-9055956 Medicago truncatula
Medtr6g026810 2.0kb upstream 2.0kb upstream 2000 false chr6: 9050613-9052612 Medicago truncatula
Medtr6g026810 2.0kb downstream 2.0kb downstream 5344 true chr6: 9052613-9057956 Medicago truncatula
Medtr6g026810 2.0kb downstream 2.0kb downstream 2000 false chr6: 9055957-9057956 Medicago truncatula
Medtr6g026810 5.0kb upstream 5.0kb upstream 8344 true chr6: 9047613-9055956 Medicago truncatula
Medtr6g026810 5.0kb upstream 5.0kb upstream 5000 false chr6: 9047613-9052612 Medicago truncatula
Medtr6g026810 5.0kb downstream 5.0kb downstream 8344 true chr6: 9052613-9060956 Medicago truncatula
Medtr6g026810 5.0kb downstream 5.0kb downstream 5000 false chr6: 9055957-9060956 Medicago truncatula
Medtr6g026810 10.0kb upstream 10.0kb upstream 13344 true chr6: 9042613-9055956 Medicago truncatula
Medtr6g026810 10.0kb upstream 10.0kb upstream 10000 false chr6: 9042613-9052612 Medicago truncatula
Medtr6g026810 10.0kb downstream 10.0kb downstream 13344 true chr6: 9052613-9065956 Medicago truncatula
Medtr6g026810 10.0kb downstream 10.0kb downstream 10000 false chr6: 9055957-9065956 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307996 5265 Fabidae View MSA
124066707 5270 Rosid View MSA
123736753 5271 Pentapetalae View MSA
122786513 5272 Eudicot View MSA
122041956 5273 Angiosperm View MSA
121349409 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.701        
cufflinks 6.035        
cufflinks 6.422        
cufflinks 21.663     High High
cufflinks 6.48        
cufflinks 19.2     High High
cufflinks 9.708        
cufflinks 5.419       Low
cufflinks 13.953     High  

0 Strain