Gene : Medtr6g007897 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR23201//PTHR23201:SF11 - EXTENSIN, PROLINE-RICH PROTEIN Description:  gibberellin-regulated family protein
Genomic Order:  279 Name:  ? Medtr6g007897
Secondary Identifier:  ? PAC:31103942
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g007897 0.5kb upstream 0.5kb upstream 3205 true chr6: 2123010-2126214 Medicago truncatula
Medtr6g007897 0.5kb upstream 0.5kb upstream 500 false chr6: 2123010-2123509 Medicago truncatula
Medtr6g007897 0.5kb downstream 0.5kb downstream 3205 true chr6: 2123510-2126714 Medicago truncatula
Medtr6g007897 0.5kb downstream 0.5kb downstream 500 false chr6: 2126215-2126714 Medicago truncatula
Medtr6g007897 1.0kb upstream 1.0kb upstream 3705 true chr6: 2122510-2126214 Medicago truncatula
Medtr6g007897 1.0kb upstream 1.0kb upstream 1000 false chr6: 2122510-2123509 Medicago truncatula
Medtr6g007897 1.0kb downstream 1.0kb downstream 3705 true chr6: 2123510-2127214 Medicago truncatula
Medtr6g007897 1.0kb downstream 1.0kb downstream 1000 false chr6: 2126215-2127214 Medicago truncatula
Medtr6g007897 2.0kb upstream 2.0kb upstream 4705 true chr6: 2121510-2126214 Medicago truncatula
Medtr6g007897 2.0kb upstream 2.0kb upstream 2000 false chr6: 2121510-2123509 Medicago truncatula
Medtr6g007897 2.0kb downstream 2.0kb downstream 4705 true chr6: 2123510-2128214 Medicago truncatula
Medtr6g007897 2.0kb downstream 2.0kb downstream 2000 false chr6: 2126215-2128214 Medicago truncatula
Medtr6g007897 5.0kb upstream 5.0kb upstream 7705 true chr6: 2118510-2126214 Medicago truncatula
Medtr6g007897 5.0kb upstream 5.0kb upstream 5000 false chr6: 2118510-2123509 Medicago truncatula
Medtr6g007897 5.0kb downstream 5.0kb downstream 7705 true chr6: 2123510-2131214 Medicago truncatula
Medtr6g007897 5.0kb downstream 5.0kb downstream 5000 false chr6: 2126215-2131214 Medicago truncatula
Medtr6g007897 10.0kb upstream 10.0kb upstream 12705 true chr6: 2113510-2126214 Medicago truncatula
Medtr6g007897 10.0kb upstream 10.0kb upstream 10000 false chr6: 2113510-2123509 Medicago truncatula
Medtr6g007897 10.0kb downstream 10.0kb downstream 12705 true chr6: 2123510-2136214 Medicago truncatula
Medtr6g007897 10.0kb downstream 10.0kb downstream 10000 false chr6: 2126215-2136214 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302849 5265 Fabidae View MSA
124068206 5270 Rosid View MSA
123744617 5271 Pentapetalae View MSA
122795726 5272 Eudicot View MSA
122051034 5273 Angiosperm View MSA
121312257 5274 Embryophyte View MSA
123349447 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.356        
cufflinks 3.806        
cufflinks 2.468       Low
cufflinks 21.548     High High
cufflinks 6.559        
cufflinks 5.303        
cufflinks 11.71     High  
cufflinks 3.588        
cufflinks 16.026     High High

0 Strain