Gene : Medtr6g007780 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR33391:SF1 - CYTOCHROME B559 SUBUNIT ALPHA Description:  lumenal portion of cytochrome b559, alpha subunit PsbE
Genomic Order:  269 Name:  ? Medtr6g007780
Secondary Identifier:  ? PAC:31104222
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g007780 0.5kb upstream 0.5kb upstream 895 true chr6: 1972291-1973185 Medicago truncatula
Medtr6g007780 0.5kb upstream 0.5kb upstream 500 false chr6: 1972291-1972790 Medicago truncatula
Medtr6g007780 0.5kb downstream 0.5kb downstream 895 true chr6: 1972791-1973685 Medicago truncatula
Medtr6g007780 0.5kb downstream 0.5kb downstream 500 false chr6: 1973186-1973685 Medicago truncatula
Medtr6g007780 1.0kb upstream 1.0kb upstream 1395 true chr6: 1971791-1973185 Medicago truncatula
Medtr6g007780 1.0kb upstream 1.0kb upstream 1000 false chr6: 1971791-1972790 Medicago truncatula
Medtr6g007780 1.0kb downstream 1.0kb downstream 1395 true chr6: 1972791-1974185 Medicago truncatula
Medtr6g007780 1.0kb downstream 1.0kb downstream 1000 false chr6: 1973186-1974185 Medicago truncatula
Medtr6g007780 2.0kb upstream 2.0kb upstream 2395 true chr6: 1970791-1973185 Medicago truncatula
Medtr6g007780 2.0kb upstream 2.0kb upstream 2000 false chr6: 1970791-1972790 Medicago truncatula
Medtr6g007780 2.0kb downstream 2.0kb downstream 2395 true chr6: 1972791-1975185 Medicago truncatula
Medtr6g007780 2.0kb downstream 2.0kb downstream 2000 false chr6: 1973186-1975185 Medicago truncatula
Medtr6g007780 5.0kb upstream 5.0kb upstream 5395 true chr6: 1967791-1973185 Medicago truncatula
Medtr6g007780 5.0kb upstream 5.0kb upstream 5000 false chr6: 1967791-1972790 Medicago truncatula
Medtr6g007780 5.0kb downstream 5.0kb downstream 5395 true chr6: 1972791-1978185 Medicago truncatula
Medtr6g007780 5.0kb downstream 5.0kb downstream 5000 false chr6: 1973186-1978185 Medicago truncatula
Medtr6g007780 10.0kb upstream 10.0kb upstream 10395 true chr6: 1962791-1973185 Medicago truncatula
Medtr6g007780 10.0kb upstream 10.0kb upstream 10000 false chr6: 1962791-1972790 Medicago truncatula
Medtr6g007780 10.0kb downstream 10.0kb downstream 10395 true chr6: 1972791-1983185 Medicago truncatula
Medtr6g007780 10.0kb downstream 10.0kb downstream 10000 false chr6: 1973186-1983185 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121627716 5273 Angiosperm Singleton cluster - no MSA
122265903 5265 Fabidae Singleton cluster - no MSA
124006930 5270 Rosid Singleton cluster - no MSA
123580964 5271 Pentapetalae Singleton cluster - no MSA
122615669 5272 Eudicot Singleton cluster - no MSA
120899820 5274 Embryophyte Singleton cluster - no MSA
122940475 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain