Gene : Medtr6g007680 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR14155//PTHR14155:SF103 - RING FINGER DOMAIN-CONTAINING Description:  anaphase-promoting complex subunit 11 RING-H2 finger protein
Genomic Order:  243 Name:  ? Medtr6g007680
Secondary Identifier:  ? PAC:31102138
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g007680 0.5kb upstream 0.5kb upstream 968 true chr6: 1774818-1775785 Medicago truncatula
Medtr6g007680 0.5kb upstream 0.5kb upstream 500 false chr6: 1774818-1775317 Medicago truncatula
Medtr6g007680 0.5kb downstream 0.5kb downstream 968 true chr6: 1775318-1776285 Medicago truncatula
Medtr6g007680 0.5kb downstream 0.5kb downstream 500 false chr6: 1775786-1776285 Medicago truncatula
Medtr6g007680 1.0kb upstream 1.0kb upstream 1468 true chr6: 1774318-1775785 Medicago truncatula
Medtr6g007680 1.0kb upstream 1.0kb upstream 1000 false chr6: 1774318-1775317 Medicago truncatula
Medtr6g007680 1.0kb downstream 1.0kb downstream 1468 true chr6: 1775318-1776785 Medicago truncatula
Medtr6g007680 1.0kb downstream 1.0kb downstream 1000 false chr6: 1775786-1776785 Medicago truncatula
Medtr6g007680 2.0kb upstream 2.0kb upstream 2468 true chr6: 1773318-1775785 Medicago truncatula
Medtr6g007680 2.0kb upstream 2.0kb upstream 2000 false chr6: 1773318-1775317 Medicago truncatula
Medtr6g007680 2.0kb downstream 2.0kb downstream 2468 true chr6: 1775318-1777785 Medicago truncatula
Medtr6g007680 2.0kb downstream 2.0kb downstream 2000 false chr6: 1775786-1777785 Medicago truncatula
Medtr6g007680 5.0kb upstream 5.0kb upstream 5468 true chr6: 1770318-1775785 Medicago truncatula
Medtr6g007680 5.0kb upstream 5.0kb upstream 5000 false chr6: 1770318-1775317 Medicago truncatula
Medtr6g007680 5.0kb downstream 5.0kb downstream 5468 true chr6: 1775318-1780785 Medicago truncatula
Medtr6g007680 5.0kb downstream 5.0kb downstream 5000 false chr6: 1775786-1780785 Medicago truncatula
Medtr6g007680 10.0kb upstream 10.0kb upstream 10468 true chr6: 1765318-1775785 Medicago truncatula
Medtr6g007680 10.0kb upstream 10.0kb upstream 10000 false chr6: 1765318-1775317 Medicago truncatula
Medtr6g007680 10.0kb downstream 10.0kb downstream 10468 true chr6: 1775318-1785785 Medicago truncatula
Medtr6g007680 10.0kb downstream 10.0kb downstream 10000 false chr6: 1775786-1785785 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310591 5265 Fabidae View MSA
124074887 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.368        
cufflinks 0.208        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.935        
cufflinks 1.305       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.187        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain