Gene : Medtr6g011400 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31752:SF10 - AUXIN EFFLUX CARRIER COMPONENT 5-RELATED Description:  auxin efflux carrier family transporter
Genomic Order:  424 Name:  ? Medtr6g011400
Secondary Identifier:  ? PAC:31104287
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g011400 0.5kb upstream 0.5kb upstream 3196 true chr6: 3215314-3218509 Medicago truncatula
Medtr6g011400 0.5kb upstream 0.5kb upstream 500 false chr6: 3218010-3218509 Medicago truncatula
Medtr6g011400 0.5kb downstream 0.5kb downstream 3196 true chr6: 3214814-3218009 Medicago truncatula
Medtr6g011400 0.5kb downstream 0.5kb downstream 500 false chr6: 3214814-3215313 Medicago truncatula
Medtr6g011400 1.0kb upstream 1.0kb upstream 3696 true chr6: 3215314-3219009 Medicago truncatula
Medtr6g011400 1.0kb upstream 1.0kb upstream 1000 false chr6: 3218010-3219009 Medicago truncatula
Medtr6g011400 1.0kb downstream 1.0kb downstream 3696 true chr6: 3214314-3218009 Medicago truncatula
Medtr6g011400 1.0kb downstream 1.0kb downstream 1000 false chr6: 3214314-3215313 Medicago truncatula
Medtr6g011400 2.0kb upstream 2.0kb upstream 4696 true chr6: 3215314-3220009 Medicago truncatula
Medtr6g011400 2.0kb upstream 2.0kb upstream 2000 false chr6: 3218010-3220009 Medicago truncatula
Medtr6g011400 2.0kb downstream 2.0kb downstream 4696 true chr6: 3213314-3218009 Medicago truncatula
Medtr6g011400 2.0kb downstream 2.0kb downstream 2000 false chr6: 3213314-3215313 Medicago truncatula
Medtr6g011400 5.0kb upstream 5.0kb upstream 7696 true chr6: 3215314-3223009 Medicago truncatula
Medtr6g011400 5.0kb upstream 5.0kb upstream 5000 false chr6: 3218010-3223009 Medicago truncatula
Medtr6g011400 5.0kb downstream 5.0kb downstream 7696 true chr6: 3210314-3218009 Medicago truncatula
Medtr6g011400 5.0kb downstream 5.0kb downstream 5000 false chr6: 3210314-3215313 Medicago truncatula
Medtr6g011400 10.0kb upstream 10.0kb upstream 12696 true chr6: 3215314-3228009 Medicago truncatula
Medtr6g011400 10.0kb upstream 10.0kb upstream 10000 false chr6: 3218010-3228009 Medicago truncatula
Medtr6g011400 10.0kb downstream 10.0kb downstream 12696 true chr6: 3205314-3218009 Medicago truncatula
Medtr6g011400 10.0kb downstream 10.0kb downstream 10000 false chr6: 3205314-3215313 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309896 5265 Fabidae View MSA
124062850 5270 Rosid View MSA
123752153 5271 Pentapetalae View MSA
122793838 5272 Eudicot View MSA
122050632 5273 Angiosperm View MSA
121312040 5274 Embryophyte View MSA
123349252 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.045        
cufflinks 0.813        
cufflinks 1.412        
cufflinks 0.139        
cufflinks 1.407        
cufflinks 0.045     Low Low
cufflinks 0.571        
cufflinks 0.999        
cufflinks 0.079     Low Low

0 Strain