Gene : Medtr6g016240 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR32285:SF12 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 13 Description:  Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein
Genomic Order:  772 Name:  ? Medtr6g016240
Secondary Identifier:  ? PAC:31103938
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g016240 0.5kb upstream 0.5kb upstream 5066 true chr6: 5925815-5930880 Medicago truncatula
Medtr6g016240 0.5kb upstream 0.5kb upstream 500 false chr6: 5930381-5930880 Medicago truncatula
Medtr6g016240 0.5kb downstream 0.5kb downstream 5066 true chr6: 5925315-5930380 Medicago truncatula
Medtr6g016240 0.5kb downstream 0.5kb downstream 500 false chr6: 5925315-5925814 Medicago truncatula
Medtr6g016240 1.0kb upstream 1.0kb upstream 5566 true chr6: 5925815-5931380 Medicago truncatula
Medtr6g016240 1.0kb upstream 1.0kb upstream 1000 false chr6: 5930381-5931380 Medicago truncatula
Medtr6g016240 1.0kb downstream 1.0kb downstream 5566 true chr6: 5924815-5930380 Medicago truncatula
Medtr6g016240 1.0kb downstream 1.0kb downstream 1000 false chr6: 5924815-5925814 Medicago truncatula
Medtr6g016240 2.0kb upstream 2.0kb upstream 6566 true chr6: 5925815-5932380 Medicago truncatula
Medtr6g016240 2.0kb upstream 2.0kb upstream 2000 false chr6: 5930381-5932380 Medicago truncatula
Medtr6g016240 2.0kb downstream 2.0kb downstream 6566 true chr6: 5923815-5930380 Medicago truncatula
Medtr6g016240 2.0kb downstream 2.0kb downstream 2000 false chr6: 5923815-5925814 Medicago truncatula
Medtr6g016240 5.0kb upstream 5.0kb upstream 9566 true chr6: 5925815-5935380 Medicago truncatula
Medtr6g016240 5.0kb upstream 5.0kb upstream 5000 false chr6: 5930381-5935380 Medicago truncatula
Medtr6g016240 5.0kb downstream 5.0kb downstream 9566 true chr6: 5920815-5930380 Medicago truncatula
Medtr6g016240 5.0kb downstream 5.0kb downstream 5000 false chr6: 5920815-5925814 Medicago truncatula
Medtr6g016240 10.0kb upstream 10.0kb upstream 14566 true chr6: 5925815-5940380 Medicago truncatula
Medtr6g016240 10.0kb upstream 10.0kb upstream 10000 false chr6: 5930381-5940380 Medicago truncatula
Medtr6g016240 10.0kb downstream 10.0kb downstream 14566 true chr6: 5915815-5930380 Medicago truncatula
Medtr6g016240 10.0kb downstream 10.0kb downstream 10000 false chr6: 5915815-5925814 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299304 5265 Fabidae View MSA
124066709 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.484        
cufflinks 1.645        
cufflinks 1.677        
cufflinks 0.979       Low
cufflinks 2.016       High
cufflinks 1.269        
cufflinks 1.536        
cufflinks 1.487        
cufflinks 1.33        

0 Strain