Gene : Medtr6g016560 M. truncatula Mt4.0v1
Defline:  (1 of 6) 1.1.1.39 - Malate dehydrogenase (decarboxylating) / Pyruvic-malic carboxylase Description:  late embryogenesis abundant protein (LEA) family protein
Genomic Order:  814 Name:  ? Medtr6g016560
Secondary Identifier:  ? PAC:31101558
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLUCONEO-PWY Medicago truncatula pathologic  
Mtruncatula PWY-7115 Medicago truncatula pathologic  

Genomics

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Expression

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g016560 0.5kb upstream 0.5kb upstream 1110 true chr6: 6272265-6273374 Medicago truncatula
Medtr6g016560 0.5kb upstream 0.5kb upstream 500 false chr6: 6272875-6273374 Medicago truncatula
Medtr6g016560 0.5kb downstream 0.5kb downstream 1110 true chr6: 6271765-6272874 Medicago truncatula
Medtr6g016560 0.5kb downstream 0.5kb downstream 500 false chr6: 6271765-6272264 Medicago truncatula
Medtr6g016560 1.0kb upstream 1.0kb upstream 1610 true chr6: 6272265-6273874 Medicago truncatula
Medtr6g016560 1.0kb upstream 1.0kb upstream 1000 false chr6: 6272875-6273874 Medicago truncatula
Medtr6g016560 1.0kb downstream 1.0kb downstream 1610 true chr6: 6271265-6272874 Medicago truncatula
Medtr6g016560 1.0kb downstream 1.0kb downstream 1000 false chr6: 6271265-6272264 Medicago truncatula
Medtr6g016560 2.0kb upstream 2.0kb upstream 2610 true chr6: 6272265-6274874 Medicago truncatula
Medtr6g016560 2.0kb upstream 2.0kb upstream 2000 false chr6: 6272875-6274874 Medicago truncatula
Medtr6g016560 2.0kb downstream 2.0kb downstream 2610 true chr6: 6270265-6272874 Medicago truncatula
Medtr6g016560 2.0kb downstream 2.0kb downstream 2000 false chr6: 6270265-6272264 Medicago truncatula
Medtr6g016560 5.0kb upstream 5.0kb upstream 5610 true chr6: 6272265-6277874 Medicago truncatula
Medtr6g016560 5.0kb upstream 5.0kb upstream 5000 false chr6: 6272875-6277874 Medicago truncatula
Medtr6g016560 5.0kb downstream 5.0kb downstream 5610 true chr6: 6267265-6272874 Medicago truncatula
Medtr6g016560 5.0kb downstream 5.0kb downstream 5000 false chr6: 6267265-6272264 Medicago truncatula
Medtr6g016560 10.0kb upstream 10.0kb upstream 10610 true chr6: 6272265-6282874 Medicago truncatula
Medtr6g016560 10.0kb upstream 10.0kb upstream 10000 false chr6: 6272875-6282874 Medicago truncatula
Medtr6g016560 10.0kb downstream 10.0kb downstream 10610 true chr6: 6262265-6272874 Medicago truncatula
Medtr6g016560 10.0kb downstream 10.0kb downstream 10000 false chr6: 6262265-6272264 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315337 5265 Fabidae View MSA
124073264 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain