Gene : Medtr5g099240 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR24349:SF83 - CALCIUM-DEPENDENT PROTEIN KINASE 6 Description:  calmodulin-domain kinase CDPK protein
Genomic Order:  5821 Name:  ? Medtr5g099240
Secondary Identifier:  ? PAC:31089325
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g099240 0.5kb upstream 0.5kb upstream 8468 true chr5: 43501466-43509933 Medicago truncatula
Medtr5g099240 0.5kb upstream 0.5kb upstream 500 false chr5: 43501466-43501965 Medicago truncatula
Medtr5g099240 0.5kb downstream 0.5kb downstream 8468 true chr5: 43501966-43510433 Medicago truncatula
Medtr5g099240 0.5kb downstream 0.5kb downstream 500 false chr5: 43509934-43510433 Medicago truncatula
Medtr5g099240 1.0kb upstream 1.0kb upstream 8968 true chr5: 43500966-43509933 Medicago truncatula
Medtr5g099240 1.0kb upstream 1.0kb upstream 1000 false chr5: 43500966-43501965 Medicago truncatula
Medtr5g099240 1.0kb downstream 1.0kb downstream 8968 true chr5: 43501966-43510933 Medicago truncatula
Medtr5g099240 1.0kb downstream 1.0kb downstream 1000 false chr5: 43509934-43510933 Medicago truncatula
Medtr5g099240 2.0kb upstream 2.0kb upstream 9968 true chr5: 43499966-43509933 Medicago truncatula
Medtr5g099240 2.0kb upstream 2.0kb upstream 2000 false chr5: 43499966-43501965 Medicago truncatula
Medtr5g099240 2.0kb downstream 2.0kb downstream 9968 true chr5: 43501966-43511933 Medicago truncatula
Medtr5g099240 2.0kb downstream 2.0kb downstream 2000 false chr5: 43509934-43511933 Medicago truncatula
Medtr5g099240 5.0kb upstream 5.0kb upstream 12968 true chr5: 43496966-43509933 Medicago truncatula
Medtr5g099240 5.0kb upstream 5.0kb upstream 5000 false chr5: 43496966-43501965 Medicago truncatula
Medtr5g099240 5.0kb downstream 5.0kb downstream 12968 true chr5: 43501966-43514933 Medicago truncatula
Medtr5g099240 5.0kb downstream 5.0kb downstream 5000 false chr5: 43509934-43514933 Medicago truncatula
Medtr5g099240 10.0kb upstream 10.0kb upstream 17968 true chr5: 43491966-43509933 Medicago truncatula
Medtr5g099240 10.0kb upstream 10.0kb upstream 10000 false chr5: 43491966-43501965 Medicago truncatula
Medtr5g099240 10.0kb downstream 10.0kb downstream 17968 true chr5: 43501966-43519933 Medicago truncatula
Medtr5g099240 10.0kb downstream 10.0kb downstream 10000 false chr5: 43509934-43519933 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300276 5265 Fabidae View MSA
124064414 5270 Rosid View MSA
123746824 5271 Pentapetalae View MSA
122786151 5272 Eudicot View MSA
122046478 5273 Angiosperm View MSA
121350946 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.088        
cufflinks 4.82        
cufflinks 3.831        
cufflinks 3.155        
cufflinks 3.84        
cufflinks 2.481       Low
cufflinks 4.337        
cufflinks 3.52        
cufflinks 6.237       High

0 Strain