Gene : Medtr6g003920 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12189 - MRNA GUANINE-7- METHYLTRANSFERASE Description:  mRNA cap guanine-N7 methyltransferase
Genomic Order:  3 Name:  ? Medtr6g003920
Secondary Identifier:  ? PAC:31105030
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g003920 0.5kb upstream 0.5kb upstream 6007 true chr6: 18542-24548 Medicago truncatula
Medtr6g003920 0.5kb upstream 0.5kb upstream 500 false chr6: 18542-19041 Medicago truncatula
Medtr6g003920 0.5kb downstream 0.5kb downstream 6007 true chr6: 19042-25048 Medicago truncatula
Medtr6g003920 0.5kb downstream 0.5kb downstream 500 false chr6: 24549-25048 Medicago truncatula
Medtr6g003920 1.0kb upstream 1.0kb upstream 6507 true chr6: 18042-24548 Medicago truncatula
Medtr6g003920 1.0kb upstream 1.0kb upstream 1000 false chr6: 18042-19041 Medicago truncatula
Medtr6g003920 1.0kb downstream 1.0kb downstream 6507 true chr6: 19042-25548 Medicago truncatula
Medtr6g003920 1.0kb downstream 1.0kb downstream 1000 false chr6: 24549-25548 Medicago truncatula
Medtr6g003920 2.0kb upstream 2.0kb upstream 7507 true chr6: 17042-24548 Medicago truncatula
Medtr6g003920 2.0kb upstream 2.0kb upstream 2000 false chr6: 17042-19041 Medicago truncatula
Medtr6g003920 2.0kb downstream 2.0kb downstream 7507 true chr6: 19042-26548 Medicago truncatula
Medtr6g003920 2.0kb downstream 2.0kb downstream 2000 false chr6: 24549-26548 Medicago truncatula
Medtr6g003920 5.0kb upstream 5.0kb upstream 10507 true chr6: 14042-24548 Medicago truncatula
Medtr6g003920 5.0kb upstream 5.0kb upstream 5000 false chr6: 14042-19041 Medicago truncatula
Medtr6g003920 5.0kb downstream 5.0kb downstream 10507 true chr6: 19042-29548 Medicago truncatula
Medtr6g003920 5.0kb downstream 5.0kb downstream 5000 false chr6: 24549-29548 Medicago truncatula
Medtr6g003920 10.0kb upstream 10.0kb upstream 15507 true chr6: 9042-24548 Medicago truncatula
Medtr6g003920 10.0kb upstream 10.0kb upstream 10000 false chr6: 9042-19041 Medicago truncatula
Medtr6g003920 10.0kb downstream 10.0kb downstream 15507 true chr6: 19042-34548 Medicago truncatula
Medtr6g003920 10.0kb downstream 10.0kb downstream 10000 false chr6: 24549-34548 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308883 5265 Fabidae View MSA
124060648 5270 Rosid View MSA
123738979 5271 Pentapetalae View MSA
122793076 5272 Eudicot View MSA
122041775 5273 Angiosperm View MSA
121344632 5274 Embryophyte View MSA
123428419 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.354        
cufflinks 0.373        
cufflinks 0.396        
cufflinks 0.249        
cufflinks 0.401        
cufflinks 0.145       Low
cufflinks 0.273        
cufflinks 0.308        
cufflinks 0.218        

0 Strain