Gene : Medtr6g004200 M. truncatula Mt4.0v1
Defline:  (1 of 1) 4.1.1.8 - Oxalyl-CoA decarboxylase / Oxalyl-CoA carboxy-lyase Description:  2-hydroxyacyl-CoA lyase
Genomic Order:  24 Name:  ? Medtr6g004200
Secondary Identifier:  ? PAC:31103273
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g004200 0.5kb upstream 0.5kb upstream 4368 true chr6: 168462-172829 Medicago truncatula
Medtr6g004200 0.5kb upstream 0.5kb upstream 500 false chr6: 168462-168961 Medicago truncatula
Medtr6g004200 0.5kb downstream 0.5kb downstream 4368 true chr6: 168962-173329 Medicago truncatula
Medtr6g004200 0.5kb downstream 0.5kb downstream 500 false chr6: 172830-173329 Medicago truncatula
Medtr6g004200 1.0kb upstream 1.0kb upstream 4868 true chr6: 167962-172829 Medicago truncatula
Medtr6g004200 1.0kb upstream 1.0kb upstream 1000 false chr6: 167962-168961 Medicago truncatula
Medtr6g004200 1.0kb downstream 1.0kb downstream 4868 true chr6: 168962-173829 Medicago truncatula
Medtr6g004200 1.0kb downstream 1.0kb downstream 1000 false chr6: 172830-173829 Medicago truncatula
Medtr6g004200 2.0kb upstream 2.0kb upstream 5868 true chr6: 166962-172829 Medicago truncatula
Medtr6g004200 2.0kb upstream 2.0kb upstream 2000 false chr6: 166962-168961 Medicago truncatula
Medtr6g004200 2.0kb downstream 2.0kb downstream 5868 true chr6: 168962-174829 Medicago truncatula
Medtr6g004200 2.0kb downstream 2.0kb downstream 2000 false chr6: 172830-174829 Medicago truncatula
Medtr6g004200 5.0kb upstream 5.0kb upstream 8868 true chr6: 163962-172829 Medicago truncatula
Medtr6g004200 5.0kb upstream 5.0kb upstream 5000 false chr6: 163962-168961 Medicago truncatula
Medtr6g004200 5.0kb downstream 5.0kb downstream 8868 true chr6: 168962-177829 Medicago truncatula
Medtr6g004200 5.0kb downstream 5.0kb downstream 5000 false chr6: 172830-177829 Medicago truncatula
Medtr6g004200 10.0kb upstream 10.0kb upstream 13868 true chr6: 158962-172829 Medicago truncatula
Medtr6g004200 10.0kb upstream 10.0kb upstream 10000 false chr6: 158962-168961 Medicago truncatula
Medtr6g004200 10.0kb downstream 10.0kb downstream 13868 true chr6: 168962-182829 Medicago truncatula
Medtr6g004200 10.0kb downstream 10.0kb downstream 10000 false chr6: 172830-182829 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301842 5265 Fabidae View MSA
124060453 5270 Rosid View MSA
123740686 5271 Pentapetalae View MSA
122785766 5272 Eudicot View MSA
122041866 5273 Angiosperm View MSA
121347920 5274 Embryophyte View MSA
123423961 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 149.241     High High
cufflinks 67.783     High  
cufflinks 25.658     High Low
cufflinks 54.478     High  
cufflinks 24.592     High Low
cufflinks 38.233     High  
cufflinks 93.811     High  
cufflinks 53.518     High  
cufflinks 66.625     High  

0 Strain